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12-4293-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3401766 [Map]; Strand: w
      • AT1G10380.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-4293-1 - 5-prime edge 
    GTCTGCGGTA GCTGCGAGCG TAGTAACGGT GCTTGTGGCT TCAACACACA 
    GTCAAGCTCG TTCGTTTGTA ACTGTCCCGG TGGGATTAAC ACGACATCGG 
    ATTGCTTCTT CCTTTATAAC TCTGCTTCTA TTCTTGTTCC TTGGTTCTCA 
    AGTAAGCACC ACTCTCACAC TTCTACTATA TCTAGTCAAA TTATTAATTT 
    ATATTGAACA CCACACTGTC TCATAGATAA TCTTGTCTCA GCTATAACTT 
    ATTACTTCTC AATTGAATTT TCAGACAAAA AACTTTTACA TTTTTTATTA 
    GTATTTAACA GTATATAGAT TTGTCTTACA GAGAGTGTTT TTTTTTTTNT 
    AACCNGGAAA AGGGGNAANG NCCCCTTNGC NANGGTTNGT NGTTNGNANG 
    GGNAGGGTTN TGNGTTAANG GNNCNTCAAN GGNNGGANNG GNTNAAAAAG 
    NAAGNTNCCA NCCNGGGCCG NAAACCCCCC NNGNCCNTAN AA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3401702 [Map]; Strand: w
      • AT1G10380.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-4293-1 - 3-prime edge 
    ATTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    AACCGCAGAC GCCAGGGTAC TCATCAAAAA CGTTGAACTT GTACTTGAGT 
    GCGATTCCGT AGTTCCAATT CTCCGGGTGG GATTCTTGGC CTGGACCGAG 
    GTTGTAGAAG CCGGAGTATG ACGAGCACTT GAGTTTGTTC AAATCCATTT 
    CGAACGATGG TCCGAGGTCT AGAGGCACGT AGACGCAACA CGTTGATACT 
    TGGAGGTTTA TGAGGCTTAT GGCCCTGCCA AACCGGAAAT TATAACCGGA 
    TTAATTAAGT AAAGCT

AT1G10380.1

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 280 Blast hits to 279 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR