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12-4355-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23177809 [Map]; Strand: c
      • AT1G62590.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
        Distance: 0; Region: exon1 (CDS)
    2. Chromosome: 1; Position: 23491004 [Map]; Strand: w
      • AT1G63330.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4355-1 - 5-prime edge 
    CTCTTATCCA AGGGCTTTTT CATGATGGCG ACTGTGATAA TGCCCAAAAG 
    GTTTTCAAAC AGATGGTTTC TGATGGTGTA CCTCCTGATA TAATGACATA 
    CAGCATTTTG TTAGATGGAC TCTGTAATAA CNGGGAAGCT AGAGAAAGCA 
    TTGGAGGTTT TCGACTATAT GCAAAAGAGT GAGATAAAAC TTGATATTTA 
    CATATATACT ACTATGATTG AAGGGATGTG CAAGGCTGGG AAGGTGGATG 
    ATGGGTGGGA TCTATTTTGT AGCCTCAGCC TTAAAGGAGT GAAGCCTAAT 
    GTTGTAACCT ACAATACCAT GATCTCAGGC TTGTGTAGTA AACGCCTATT 
    ACAGGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23177925 [Map]; Strand: c
      • AT1G62590.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4355-1 - 3-prime edge 
    GATAAGAGTG GTGTAAGTGA CTGTATCGCC AACCAATCCT CTATGAGACA 
    TCTCGCGGAA GAGTTCCGTA CCATCTTCTA CTCTCTTAGA CTTGCAAAAT 
    CCCTTTATGA GAGTATTATA TGTAACTAAA TCTGGGAAAC AGTCCTTGCT 
    AACCATGAAC TCAAACATCT GCTTGGCCTT GTCTAGACGA TCATGCATAC 
    AGAACCCGTT GATCAATGAA TTGTAAGTGA AAATATCAGG ATCTATAGAC 
    CTTTTGATCA TGTCATCGTA CAATTTCTCA GCCTCTACAA ACTTTCCTTC 
    TTTCAGAAAC GCATCGATCA ATGCATTGAA CGTGACTAAA TTAGGGTTGA 
    TTTTCTTCTC AATCATATCA CTCAGTAGTT GAGAGGCATC ACTCCATCTT 
    CCATAACTAC AAAGGCAACT TATGAGGGAG CTGTAGGTGA TAACATTAGG 
    TCTAATACCT TTGTTATCCA TTTCAGTGAA CAGATTGAGT GCATCATTCA 
    CGTCTTTGTA CTTGCAAAGA CCATCAATGA TTGTGCTGTA GATCACAACA 
    TCAGCCTCTA TTTTTGATGC TTCCATCTTG TTGAGCAGAT TTAAAGCCAA 
    ATCAGTATCA CCTCTCTTAC ATAAACCATT TACTACCACT CCATAAGTAA 
    CCAGATTTGG TTGACAGCCT CTTTGAACCA TTCGATCAAC TAACGCCACA 
    GCTTCAGAAN

AT1G62590.1

Model type
Protein coding
Short Description
pentatricopeptide (PPR) repeat-containing protein
Computational Description
pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G63330.1); Has 66706 Blast hits to 15368 proteins in 309 species: Archae - 3; Bacteria - 71; Metazoa - 1158; Fungi - 1331; Plants - 61521; Viruses - 0; Other Eukaryotes - 2622 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G63330.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G62590.1); Has 64592 Blast hits to 15428 proteins in 305 species: Archae - 4; Bacteria - 72; Metazoa - 1099; Fungi - 1181; Plants - 59820; Viruses - 0; Other Eukaryotes - 2416 (source: NCBI BLink).
Link
InterPro Scan - TAIR