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12-4477-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2315511 [Map]; Strand: w
      • AT2G05980.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 12-4477-1 - 5-prime edge
    GGGANAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TTACCAATGC AAAGCTCAAT CCAATGAATA
    AACATTTCCG GTAAGTGAAT AGCCTTGAGG ACGTTAATCA GAAAAGGCCA
    CTGCACAAAG TCAAAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2314352 [Map]; Strand: c
      • AT2G05980.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 12-4477-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAC 
    CATCTGTGCT TCTATCTTGT CTAGCCAGCT CAATTTGGCT CTCAATTTGA
    TTTAGAAAAT CTGCTCTGTG ACGCTTTCTT CTATGAGTAT TCATCACCTC
    AGCAACTGTC GCATTATTTG GAATT

AT2G05980.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.0e-42 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR