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Mutant Lines
12-4500-1

12-4500-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 18926587 [Map]; Strand: c
  - AT1G51055.1 - [+] show detail - FBD-like domain family protein
    Distance: -272; Region: promoter
  - AT1G51060.1 - [+] show detail - histone H2A 10
    Distance: -289; Region: promoter
Flanking Genome Sequence: 12-4500-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
TTCAAATCTT CACACACAAA TTTCACAAAG AACCCGGATT CAATTTTTGA 
AAATTGGGCT CTTTGGTAAA ATGTAAAACG TTTGGGCCGA AAAAAGAAGA 
AAAAAACAAA ACTGTAAAGA GGCAAAGAGG ATATTTTGGT AATTCACTCT 
GACGCNGGAT C
```

5 prime edge [+] show sequence

Chromosome: 1; Position: 18926586 [Map]; Strand: c
- AT1G51055.1 - [+] show detail - FBD-like domain family protein
  Distance: -271; Region: promoter
- AT1G51060.1 - [+] show detail - histone H2A 10
  Distance: -290; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT CAAAAAGTCC TCTTTTTTTA TTCATCGAGT 
AACAGTTTTT GTAACCTAGT GTTGTCTGTT TTTCAAATCT ATTTCTCAGA 
TTTTGTTATG AAGCGAGGAA ATTTCGAATC TCCCTCAAGC TCTGATCTTC 
CTTCTTCATC ACGATTCAAA CTAAATCCCC AAGGTTTTGT TCCCGCTTCA 
TTCCTTTTTG ATTTTCATAA TTCGAATT

AT1G51055.1

Model type: Protein coding
Short Description: FBD-like domain family protein
Computational Description: FBD-like domain family protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT1G50980.1); Has 362 Blast hits to 359 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G51060.1

Model type: Protein coding
Short Description: histone H2A 10
Curator Summary: Encodes HTA10, a histone H2A protein.
Computational Description: histone H2A 10 (HTA10); FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2A (InterPro:IPR002119), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: histone H2A 13 (TAIR:AT3G20670.1); Has 3904 Blast hits to 3899 proteins in 361 species: Archae - 0; Bacteria - 0; Metazoa - 2554; Fungi - 302; Plants - 612; Viruses - 4; Other Eukaryotes - 432 (source: NCBI BLink).
Link: InterPro Scan - TAIR