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12-4601-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 158307 [Map]; Strand: c
      • AT4G00356.1 - [+] show detail
        Distance: -1578; Region: intergenic
      • AT4G00360.1 - [+] show detail - cytochrome P450, family 86, subfamily A, polypeptide 2
        Distance: -2461; Region: intergenic
    Flanking Genome Sequence: 12-4601-1 - 5-prime edge 
    GTTGGGAGAC ATAAATACAA TGGATGATGT GGTGTATCAC ATCAGTCTAA 
    CATATGGCGC TACTTAACGG TCAATCAAGA GGCTTAATTA CTCCCCAATG 
    CGGCCTACGA CAAGAAGATC CTCTCTCCTT CTATTTATAT GTACTATGCA 
    CAAAAGTGCT GATTGCTAAT ATTCAGAAAG CATAAATAGA TAAGTTAATA 
    ATTAGTATAA AGGTGGTAAA TGCAAGTCAT GCNGGTTTCT CATTTACTGT 
    TTGCGGATGC TGAACCATCC CTAGTATTTA ATAGACTACA AGGCAGGTGA 
    AAAATAGCTT TCCTTATAAA TTGCTCAGAC CTGGTAAAAA TGGTGTCTTT 
    CCGTAAGAGT GACCAACTTT CTTTACGTAC ATGGAGGCGA TACAAAACGA 
    CATGGAGGAA TTTGATTCTT TTTCTTTATC CTTAGTTCTT TGAAGTGCAA 
    ACACAAAGGC AGATAATCTA GCGCAAAGAA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 158423 [Map]; Strand: c
      • AT4G00356.1 - [+] show detail
        Distance: -1694; Region: intergenic
      • AT4G00360.1 - [+] show detail - cytochrome P450, family 86, subfamily A, polypeptide 2
        Distance: -2345; Region: intergenic
    Flanking Genome Sequence: 12-4601-1 - 3-prime edge 
    CTCCCAACAA TCCATTTTTC ATAATAAACT CTCGATAAAA TTTGATTCAA 
    GCTGATCATA AGCCTTTCAT GTTAGTTTTT ATAACCATAA ACTTTCTTTT 
    GTATGACGAA TTTGTTCAGA GATCATAAAA CATCTCTTGC GTTATAAGAA 
    TATTATCTAA AATCAATGGT CTTTCGATAA AGACTGATTG CGTTTCTAAA 
    ACAAAATTTA TTTTTTCTAT TTTTTTATTT ATTTAATTTT TCCTCTCATT 
    TTTAGTTGTT TTTATAATAT ACTAAGCGAG GTAGTATAAA TCTAGAATCC 
    TGAACCAGCA GTCAAATATC ACTATTTAAA GCTAACTATT TAGGTTTAAT 
    AATACCTTAG GATATTATTA CCATTTACGT AAAAAAGTTT GAACCTGGAA 
    AACATATATA TCTACGTAGA GTACCGAATA TTCTAAACCA TTTAAAATAT 
    TTTATAATGA TCAACCATGA TTGAAATCAA GTAGAAAAAC TTGAACAATG 
    ATCTTCTANT TCATTTTANT TGTTTCACTT AAAAAGGATT TAAAAAGAGA 
    GTCACNTTGC GTNNTAAATG CNTTNNGAGG NTNGNCAAGC CTCTCNNNCT 
    NTCTGACNTN NACNNACTAC NNNCAGNNGN GNNCCNTNNG NNNAANNACA 
    AAAANNANNN NGGNNNGNNN NNGGGCNNAN NANNANNCNN GAGNGNGNNN 
    NCNAANNNNC NNNNNGGGGG GN

AT4G00356.1

Model type
Pseudogene
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Link
InterPro Scan - TAIR

AT4G00360.1

Model type
Protein coding
Short Description
cytochrome P450, family 86, subfamily A, polypeptide 2
Curator Summary
Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.
Computational Description
"cytochrome P450, family 86, subfamily A, polypeptide 2" (CYP86A2); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 4 (TAIR:AT1G01600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR