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12-4764-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3612 [Map]; Strand: c
      • AT3G01015.1 - [+] show detail - TPX2 (targeting protein for Xklp2) protein family
        Distance: 0; Region: exon1 (CDS)
      • AT3G01010.1 - [+] show detail - UDP-glucose/GDP-mannose dehydrogenase family protein
        Distance: -730; Region: promoter
    Flanking Genome Sequence: 12-4764-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AAGAACTATT ATAGTTCTTC 
    AACAATCGAA GAGAATCCGT ATCAGAAATT GGAGAATCCA GCCAGAATTT 
    GGAGGATGGA AATGAACAAG TCGAATTTGG AGATTCTGAT GAAACTAGGG 
    TTTCTTTGAT GAAGAGGAGA AGAGAAAAAG TATTGGAAGA AGCGAGAATG 
    AGTATACCTG AATTTGGTAA AGTGATGCAT CTAGTTAAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 257451 [Map]; Strand: w
      • AT3G01690.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 12-4764-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCAGAT 
    GGATCAATCA TTTAAGAGAA AGAAATATTT TTGAGTTGGT CCTAAAACTC 
    AAAATGGATC ATCAGATCAC TCAATCAGAT TGATGTGGGT AAAGGACAAA 
    CCTTTCCAGT AGATTGTCCA TACCCGGAGT AATCGTATCT GCAACATCAC 
    AACCAATAAT ATCAAAGACT GATTGATTCC AAGCAGATCT TAGCCCAAGT 
    TTCCTTTTTT ATTTGAATAA ACACTCTAAA CATAAACAGA GCAAAAACTA 
    GAAACAGAGC TAGAAACGTG AGAATAAAAA CAGGGCAAAT CCTATACCAA 
    ATCAATCAAT AGAAAGCATA CAAAGATAAC ATTTTTAAAT CAGCATCATA 
    ATAATAAAAT CAATCGTATT ACAAAGGGAG AGAAAGAAAA ACAGACCCCA 
    TAAGATTAAC CTTGAGATGG ATGCTAAGCT CGATGAAGAG CTCATACATC 
    TGTCCCAGAT CGGCGGCGTT GCCATGGGAG TAGAGGAGAG TGGAGGTAGC 
    CATCGGATGC CTCACGTACA TGCCCACGAT CTCTGTGCCT CTCCTGGTCC 
    GAAGCT

AT3G01010.1

Model type
Protein coding
Short Description
UDP-glucose/GDP-mannose dehydrogenase family protein
Computational Description
UDP-glucose/GDP-mannose dehydrogenase family protein; FUNCTIONS IN: NAD or NADH binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G15490.1); Has 4547 Blast hits to 4540 proteins in 1270 species: Archae - 101; Bacteria - 2703; Metazoa - 193; Fungi - 72; Plants - 179; Viruses - 0; Other Eukaryotes - 1299 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01015.1

Model type
Protein coding
Short Description
TPX2 (targeting protein for Xklp2) protein family
Computational Description
TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G15510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01690.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G14390.1); Has 3903 Blast hits to 3890 proteins in 823 species: Archae - 8; Bacteria - 1296; Metazoa - 705; Fungi - 204; Plants - 316; Viruses - 6; Other Eukaryotes - 1368 (source: NCBI BLink).
Link
InterPro Scan - TAIR