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12-4799-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8944798 [Map]; Strand: w
      • AT2G20760.1 - [+] show detail - Clathrin light chain protein
        Distance: 0; Region: exon1 (CDS)
      • AT2G20770.1 - [+] show detail - GCR2-like 2
        Distance: -520; Region: promoter
    Flanking Genome Sequence: 12-4799-1 - 3-prime edge 
    AATGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    TTAGAGAGAG GAGGGTTTCC AACGCCGTGA GTGGCGCCGG TCAGTGTTCT 
    AATTCTCGCT TTTTCATTTC AATTCATCGC TTGTTATGGA ATAGGGCTAG 
    ATCTCAAGCT

AT2G20760.1

Model type
Protein coding
Short Description
Clathrin light chain protein
Computational Description
Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT2G40060.1); Has 1791 Blast hits to 1279 proteins in 282 species: Archae - 0; Bacteria - 563; Metazoa - 557; Fungi - 96; Plants - 161; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G20770.1

Model type
Protein coding
Short Description
GCR2-like 2
Curator Summary
Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.
Computational Description
GCR2-like 2 (GCL2); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: extrinsic to membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: LanC-like protein, eukaryotic (InterPro:IPR020464), Six-hairpin glycosidase-like (InterPro:IPR008928), Lanthionine synthetase C-like (InterPro:IPR007822); BEST Arabidopsis thaliana protein match is: G protein coupled receptor (TAIR:AT1G52920.1); Has 689 Blast hits to 684 proteins in 212 species: Archae - 0; Bacteria - 201; Metazoa - 271; Fungi - 68; Plants - 112; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR