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12-4858-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24679020 [Map]; Strand: c
      • AT1G66230.1 - [+] show detail - myb domain protein 20
        Distance: 605; Region: intergenic
      • AT1G66235.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 3986; Region: intergenic
    Flanking Genome Sequence: 12-4858-1 - 5-prime edge 
    GGTTTTGGTA CAAATTATTG ACAAGGTTAA AAACAAATAC TTTTGCGATT 
    GTTTGACCCG GTGTGGTAAC AATTTAACAT AAAACGACCA AAGACATATA 
    ATATATAATT TTTCTTATAA AAAATTAAAT TATTTTAATA AAATTTTAAA 
    ATCTTAAGTT GACATCTTAC TCAGACCACA TATTTTGTGG CATTGTAATC 
    TTCAAGACTT TCAGGAAAGT CATAGTCTAA GCAGATCGTT ACACCTCATT 
    TCTCTCACCT AAAATTAATT ATGTGGACCT CATCCTTCTT TTTTGTTTAA 
    TTGTGAAAAT TCATAATTTT GTTACATGGT GTTAGCATTA CCTTTTAATA 
    GATAGATCAA TTTGAAGTTT TCCTATAGAG AACCTGTTTA ACTATAGAGG 
    CAAAAGTAAA TGTATTATGG TAATATAAGT AGGTAAATGT ATTAGCTTGT 
    ATAGTTAACA TACATGTACC ATCATACTTT TTGAAATTTG TGATATTCTT 
    ATTATATTAC GCAAGACTTA TATGCCTAAA AAAGTATGAT AGATGAAACT 
    ACAAGTGTCT TATTTCTATT TTCAAGTGAT AGTAAGCCTG AACACGAGGA 
    AATATGGAAC CCAATATACA AAGCAAAAAA AGAAATGGAC CAAAGACACA 
    TTNCTCTCTT AACTCTTTTT GTCTGTACAA AATAAATAAA CTTTATTTTT 
    GTTTCTA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24679136 [Map]; Strand: c
      • AT1G66230.1 - [+] show detail - myb domain protein 20
        Distance: 721; Region: intergenic
      • AT1G66235.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 3870; Region: intergenic
    Flanking Genome Sequence: 12-4858-1 - 3-prime edge 
    CCAAAACCTG AACTTTGGCT TTGGAAAAAG ATAGTGAGGG ATTAAACTTA 
    GGAATTAAAT TACCCTAAAT GATATGACGG ATATTTCACT CAAAAAATTA 
    AACCACATTA TGTTTTCCAT AAGATATTAA TATAAATACA TCATATATTT 
    CAGACAAGAA TT

AT1G66230.1

Model type
Protein coding
Short Description
myb domain protein 20
Curator Summary
Encodes a putative transcription factor (MYB20).
Computational Description
myb domain protein 20 (MYB20); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 43 (TAIR:AT5G16600.1); Has 8410 Blast hits to 7811 proteins in 453 species: Archae - 0; Bacteria - 0; Metazoa - 663; Fungi - 296; Plants - 5767; Viruses - 4; Other Eukaryotes - 1680 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66235.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24380.1); Has 283 Blast hits to 282 proteins in 34 species: Archae - 0; Bacteria - 19; Metazoa - 15; Fungi - 0; Plants - 234; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR