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12-5038-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2613056 [Map]; Strand: c
      • AT3G08600.1 - [+] show detail - Protein of unknown function (DUF1191)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-5038-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA GAAGACCCAA GACAGGAGCG ACATAATCAT 
    AACCAGACAA AGGGTAATAC AAGTGAGAGA AATTAGCTAG GTTTTGATAA 
    ACCAAAACAA GCCTTGTCAC ATACGGCTTG ACGATAACGC CGCTGGGAAT 
    TGAGAACTCA TTAAAAGGAG TGACTCCACG TTTTCTAAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2613069 [Map]; Strand: c
      • AT3G08600.1 - [+] show detail - Protein of unknown function (DUF1191)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-5038-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AAGCTANGAA TCTNTCTGNG CTTAATTTGC CNCAGCTNGN TTTAAGGNNG 
    TNTAANGATC CTATNATNAG TCNATTTNTC TGATCTGNNA CNANTCCCAC 
    AAGGGTCTAA TTGCTAAGNG NGTTANATTC NATTCTNAAG GNGAACCTNA 
    GTTTGGANCG ATNCGNATCT NNGCCNTGGA ANCACANGTG GANACTGAGC 
    ATCAGGGACA TTTCTCTGTG GTGGTGAAAT CTGTGGCTTC TGCTCCGAGT 
    CTAGCTCCTC CTGGGATTGA GAGTAAGAAG AAGAAGAAGA GCTCTGATTC 
    CAATTCCAAG ACTTGGATCA TTGTTGGGTC GGTGGTTGGT GGATTGATAC 
    TGTTGGGGCT TTTACTGTTT CTGGTTTTGA GATGTCGAAA TTACAAGAAG 
    CAAGAGAAAA TGAGGGAGAT GGAGAGAGCT GGAGAGACAG GGGAAGCTCT 
    GAGGATGACT CAGGTTGGTG AAACAAGAGC ACCAACTGCT ACTACGACTC 
    GTACACAACC AATGCTTGAA ACCGAATACG CAGCTTAGGA TACTTTTGTG 
    TACATCATCA TCATCATCAC ATCTTCTTGA TCATCTGTTA CTGTCTTTTT 
    CTTTTTTTCT TCTACAATTA TTCTTCTTTT GGGAAAGTGT TTCTTTTTCT 
    GATTATTTNT TCTTTGGGGN AAGCAAGNTG ATACTTNCAN ATTNATCNTN 
    GTTCTNTGNT GGTGATAGG

AT3G08600.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1191)
Computational Description
Protein of unknown function (DUF1191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1191 (InterPro:IPR010605); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1191) (TAIR:AT4G22900.1); Has 124 Blast hits to 124 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR