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12-5128-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13318881 [Map]; Strand: c
      • AT4G26320.1 - [+] show detail - arabinogalactan protein 13
        Distance: -1411; Region: intergenic
      • AT4G26330.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: -1527; Region: intergenic
    Flanking Genome Sequence: 12-5128-1 - 5-prime edge 
    GCATCACTTT CGTCTGCATT TTGAGTGATC AAAATCATCA AACTCGATAA 
    TGTCATCTTC ATTGTAAAGT TTTTCATTTT TTTTCCTTTT GTAAAATTCC 
    TCTGTTTTCT CTCTGTTCTT CATGTAGTTC TTGCGATTTG CCGAAAATTG 
    AATCTCGTTT CTTGATTACA GTTTGTATCC ATGTGAATAT GTCTAGATTT 
    TTTTTTTTTT TTTTNNNNNN AANANCNTNG GNNNAAAAAN CNNNNTTTNG 
    GGNTTCCCCC CNNANGNNNA AAAAAAANGG GGGGGGNTNA AAANTNNNNN 
    GGGGCCCCCC NAAANNTTNG GGGGAAAAAA AGGGGNAAAA NNNAAGGGGG 
    TTNGNNNNAA ANNCCCCNGT NNGGGGGGNN NAAAAAAANC CCCCCCGGGN 
    NNGGGGGAAA AANNGGGGGC CCCCCNNGGC CCNTNGGNAA AAAAAAANTT 
    TTNTTAANNG ANNNNCCACN NTTTTTAAAA AANCNNGGGN CGNNAAAANT 
    NNNNNNTTTN NNNNNAAAAA NNANGCNCCA ANCNNNNGNG GNGNGGGGNN 
    CCAAAANNAN NCCCCCNCTA AAAAAGAGGG GGGGGNGGNG TNTAAANANA 
    AAANTNTNGG GGGCCCNNAG ANGGNGGGNG GGGGGAGATA NNGGGNTNNN 
    NATNNNCAAA AAAAAAAAAN GGNGTNNNGA GNGGGGAGAN AAACNCACNG 
    GGNNTNNNTN TTTTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13318991 [Map]; Strand: c
      • AT4G26320.1 - [+] show detail - arabinogalactan protein 13
        Distance: -1521; Region: intergenic
      • AT4G26330.1 - [+] show detail - Subtilisin-like serine endopeptidase family protein
        Distance: -1417; Region: intergenic
    Flanking Genome Sequence: 12-5128-1 - 3-prime edge 
    TTNAAAAAAT GAAATGATAT GTAGCGATGG AAGAGAAGAG GACCATAAAC 
    ATAAACGTGA TCACGATCGT CTTCCGCAGT TTCAGGATAG AGCAAACCTG 
    GAGAAGGAAG ACATAGACAA GTCAAGAGAC ATAAAGCCAA TCGACCTAAT 
    TGCTGGAGCG GAAAGAAGCA GACTAGCTCA AGCATCTCTC GGCTGCTTAT 
    ACGATCGGAC GGTGGGATCA ATCGTAAACG CTGCCAAATC TCAGCCGACA 
    AATGGGCTAC AGACATAACC GTCTGGCCGT TGAACACCAT GTTCATACAC 
    ACACAGAAAA AAAAACTGTA ACTGAATGAT GATTCCGTGA TTTTCGTTCA 
    ATTTGTCTGT GTATGTGTAT ACAATGTACA GAGGTCGGGG GCTTTTCTAN 
    ATCTTGCCAC GTTGACTTCC ATGTTTAGTC ATCATCATTG ATCGAATAGT 
    TCCTAATCCA TTTTTAAAAG TATTTTATTG ATTAAACAAC TAGGAAATAA 
    TCAAATATGA AGCCTTTTTT GAGTTAGTAT TTGAACAAAA TTAAAGGATT 
    CTACACTATA TTTCGTTTCG ATTCTTCAAC AATAAGAATT

AT4G26320.1

Model type
Protein coding
Short Description
arabinogalactan protein 13
Computational Description
arabinogalactan protein 13 (AGP13); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 14 (TAIR:AT5G56540.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G26330.1

Model type
Protein coding
Short Description
Subtilisin-like serine endopeptidase family protein
Computational Description
UNFERTILIZED EMBRYO SAC 17 (UNE17); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, double fertilization forming a zygote and endosperm; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR