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12-5193-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10315434 [Map]; Strand: c
      • AT2G24250.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: -524; Region: promoter
      • AT2G24250.2 - [+] show detail - Protein of unknown function (DUF295)
        Distance: -514; Region: promoter
    Flanking Genome Sequence: 12-5193-1 - 5-prime edge 
    CTTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATACT GTTACGCCAG AACTTTCCCA GAGAGTGTCA 
    ATGAGAAAAG AAAATTCCTT CCAAAAGCTA AAGCTAAGTT CTTGAAATCA 
    TCTTTAAAGG AAAATGAAAC TTACTTCTAT AGTTAGCCTG GGAGTTTCAT 
    TGATGGGGTT ACCAAGCTCT GTGTTATTTC ATTAATGTTG CGTACTAGCG 
    TTTATTAACC GTTCCAAAAA CAAGAACTCA CATCACTTTA CGAGTTCCTA 
    AGATTCAAAC CGATCGAAGA TACCTCTTGG CAAATCAGTA TCAAAAATAT 
    TCTTGGGTAC AGAGGAGAGA AACAAGAGTA CAAAACAATC AACAGAACGA 
    AGAAAAGAAA CATAACAACA ACATAATGCA AAAACGACGT CATCTCAAGT 
    CTATCCGAAA ACCAAAGTCT TAACCGGCTC ATGTGATATA AACCGTCTCA 
    ATCCCTTCGG TTCTTTGCTT TCCCAATCAA TCCAACCCCA AACCAAATTC 
    GCTCTAAATC TTAACTAGTC TCTATCCCCA TTTGTCGACG CTACGAAAGG 
    GCTCTGAAGA ATCTGCAGGA AGCTCCAACT TTTTTCTCCA AGTTACNGGT 
    ACTACTACGA CCTATCTCTT TAATCCCTGC GAATATTCTA TAATGAACTG 
    NGAATTTTCT GTATACCAAC TTTTANTTTT TCCTGTGGCA ATTGATCAAC 
    CCAGAATTGA TTATGACCTT GGGAG

AT2G24250.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G64840.1); Has 154 Blast hits to 151 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G24250.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G64840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR