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Mutant Lines
12-5367-1

12-5367-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 23402610 [Map]; Strand: w
- AT3G63370.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

ATTGGAGCTT ATGTTTCGAA TGGTGAACCT GCTTCCGCTC TTGCTCTCTA 
CTGGAATATG CGTGTGGAGG GCAGTTCCTC TCGGTCTTTC CTCTTTTCCC 
GCCTTGCTTA AAGCCTGCGC CAAACTTAGA GATATCCGAA GTGGCTCTGA 
GCTTCATTCT CTCCTCGTTA AACTTGGCTA CCATTCAACT GGTTTTATCG 
TCAATGCGTT GGTTTCCATG TATGCTAAGA ACGATGACCT TAGCGCTGCA 
AGGCGTCTGT TTGACGGATT CCAAGAGAAA GGAGATGCTG TTCTCTGGAA 
TT

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23402494 [Map]; Strand: w
  - AT3G63360.1 - [+] show detail - defensin-related
    Distance: -903; Region: promoter
  - AT3G63370.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 12-5367-1 - 3-prime edge
```
GCTCCAATCA TGGCATTCCA CGCAAAGGCA GTTCTGTCAG GCATTTCGTC 
AAACACTTTC TCTGCGTCAT CCAGAGACCC GCACTTACCG TACATAAAAA 
CAAGCT
```

AT3G63360.1

Model type: Protein coding
Short Description: defensin-related
Curator Summary: Encodes a defensin-like (DEFL) family protein.
Computational Description: defensin-related; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Knottin (InterPro:IPR003614); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63370.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Curator Summary: Encodes a chloroplast RNA editing factor.
Computational Description: ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1); Has 48148 Blast hits to 13528 proteins in 241 species: Archae - 0; Bacteria - 4; Metazoa - 44; Fungi - 62; Plants - 47536; Viruses - 0; Other Eukaryotes - 502 (source: NCBI BLink).
Link: InterPro Scan - TAIR