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12-5381-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18356777 [Map]; Strand: c
      • AT3G49510.1 - [+] show detail - F-box family protein
        Distance: 269; Region: intergenic
      • AT3G49520.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: -2807; Region: intergenic
    Flanking Genome Sequence: 12-5381-1 - 3-prime edge 
    ATTTTACTTA AGTTCCATAG TTTACACATG AATTGATGTG ANTCTTGATT 
    T

AT3G49510.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G49520.1); Has 2110 Blast hits to 1239 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G49520.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G49510.1); Has 1137 Blast hits to 1079 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR