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12-5384-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 411401 [Map]; Strand: c
      • AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -717; Region: promoter
    Flanking Genome Sequence: 12-5384-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACCA GTTTTCATAT CTAAATTTCT AATGCTCATG 
    AATTATCATG ATCTACCTTT TTGATATAAC CAAGAATTTA ACTTACTAAT 
    TAGAAAATGT AAACTAACAT ATTTGAAATT TGAAACACAT ATTCTGCTGA 
    TCAGTTTTAA ATTTAGTTTG AGAACCTAGC AAATAAAAAT GGAAAGAGAA 
    ATATGGATTA CACCTTTTTC TCAAAAGGAT GTTGTGTTCT TTCTTTAATT 
    GACCTAATAA TTGGGCTTAG ATATTTAGCC TTGGAAATAT AGTATTGGGC 
    TCTAATACAG GCCTTAATAT ATTCTCTTTT CAATTCTGGT GACGTGGTTA 
    CGTAAACTTA CGTTCCCTCC CGAAACCCTT AAAAAATTCA ATTCCCGTTA 
    TGAGTNNTTT TTTTTTTTTT TTTNNAAAAA ANCCCCCCCC NNGGGGGGGG 
    GGGGNGGNNN NNNNAAAANC CNNNNNNNGG GGNAANNAAA AAAANNNNNN 
    NNNCCCNNAA AAAANAANNT TNNNNNNNGN NNCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 411642 [Map]; Strand: c
      • AT4G00955.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: -476; Region: promoter
    Flanking Genome Sequence: 12-5384-1 - 3-prime edge 
    CCCCTCTGTA TCTTCTTCTT TAGGGTTGCG ACTTTTATTT TCTACCAAGG 
    GTTTGATTGG TTTAAAATAC AGCCTGTTAC GGATGTGGAT GTGAGAGTTT 
    TGGGCCGTTT GAAGTGATAT TAAGCAATTT ATATGATTAA ATTAGCAATT 
    GGAGACATGT GCATTTGCGA AAAAATTATA AATGGTGACA AGTTGTCAAC 
    ATTTGTGGTT GTAGTTTAGC ATTAAAATTA CCAAAAATTC ATATAATAAT 
    ATAGTTTATA CTAAAAACAA AATTTCTATC ATTAATTATA AGAAAACTGT 
    ACAAATTTTT TTAAAATAAA TGATAAAATA GATAATTTTA GTTACGAAAT 
    TGAAACATAA CAAGAAATAG TTAGTTTTAT TGTAAAATAC GATGAAGAGA 
    GAGAAAAAAA AACCAAAAAN TNNTTTTAAA AGGTNNAAAN CNTNTTTTAA 
    NTTTANGGAA AAAAAATTNT AATTNTAAAT NTNTTTNNTT NCGTTNGTCC 
    AANTTTTTAA AAANAANTCA NCGTTCANCN AAGGGGACAA ATTNCNTGAA 
    GGGGAGTAGT TTTNTGAGTT TCTTATNTTT ACAGGAAGGN NATNAATGTT 
    GAAATCNATT CAATCAACGT TCAACNAAAA NGGGGATGAT TTCTTATAAG 
    TNAAATTNGG TTTNGATCAT AATCTTGATC GGAGGATCTT TTAACAACCC 
    ACNANTTNTT NTGCCGGGGN TAATTTA

AT4G00955.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G23450.1); Has 94 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR