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12-5390-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2315640 [Map]; Strand: w
      • AT2G05980.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 12-5390-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA CTAGAGATTG ATTCCTTATG GTAGTCTTTT 
    ACTAGTTCAG AAGCTAACAA CAGATTCTCC ATCATCAAGC GGTCTTTAAT 
    GAAAGCAGAT TGGTTTGGTG CAATAGATGC AGGGAGAATT TCTTTGAGCC 
    GGTTAGCCAT AAGCT

AT2G05980.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.0e-42 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR