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12-5397-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 419094 [Map]; Strand: w
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-5397-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAT TCTTTGGTGC CGCGCAGTGC ACGCCGGATT 
    TGTCTGAGAA AGACTGCAAC GACTGTCTCT CTTATGGTTT CGGTAACGCG 
    ACCAAAGGAA GAGTTGGTAT CAGGTGGTTT TGTCCAAGCT TGTAATTTTC 
    AGATAGAGAG TGACTTGAGA TTCTTCCTTC TCGACTCCGA GTATGAGCCT 
    GATCCCAAAC CAGGTAATCA GAGCACTCTG TCTCAACACT TGTATTCTAC 
    AATTATTTTC TTTGTTCTAA CAGTGTATGT CTTGACAAAT TTAATCTTAG 
    CAGGAAATGG CAAAGTAAAA ATCATTATTG CCACCGTTTG CTCTGTTATT 
    GGTTTTGCTA TAATCGCAGT CTTTCTTTAC ATCTTTATGA CAAGGAACAG 
    AAGAACGGCA AAACAGAGAC ATGAAGGTGG GCTTATTAGT CAGAAAGTCA 
    AATCTTCAAA GTTTGAAAAA CAATCTTGTC GAGAGTTTTA ACTTTAAAAG 
    ACCCTTTTGG TTTTATTGCT TTTGGATCAG GCAAAGATCT TGAAGAGCTT 
    ATGATTAAAG ATGCACAATT ATTGCAACTT GACTTTGATA CCATAAGATT 
    AGCAACTAAT GACTTCTCTC GTGACAATCA ACTTGGANAA GGTGGCTTCG 
    GTGCAGTTTA TAANGGNTAT TAATCTTTTC TCATGTTTAT GATCTTTCCC 
    GACAAATCAA ATATTTTAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 419070 [Map]; Strand: w
      • AT4G00970.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 41
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-5397-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AAAGAATGTG GTGTAAGGTG GAGACCCAGG ATCAGTTCCT TGAGCATACT 
    TCCTCTTAGA GCCACCTGAT GCAGCCTCGG ATCTGAGTCG ATTAAGTAAC 
    TCGCTCTGCA ACCGAATAAA CTCGTTTCTA TCTCCCGTAG CATTGCTCGG 
    ATTTGGTGCN TTCCAGAGGA GGACTCGTTT CGAGTTTCCC GAAAATGGGT 
    TTGTCTGAGT AACGAAACAT ACATTTCGTG GCTCGCACGT AAGCT

AT4G00970.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 41 (CRK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (TAIR:AT4G21410.1); Has 118247 Blast hits to 116820 proteins in 4488 species: Archae - 94; Bacteria - 12773; Metazoa - 43795; Fungi - 10171; Plants - 33437; Viruses - 407; Other Eukaryotes - 17570 (source: NCBI BLink).
Link
InterPro Scan - TAIR