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12-5551-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23164628 [Map]; Strand: c
      • AT1G62560.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 3
        Distance: 1979; Region: intergenic
      • AT1G62570.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 4
        Distance: -4508; Region: intergenic
    Flanking Genome Sequence: 12-5551-1 - 5-prime edge 
    CTTCAAAGAA AACTATAGCT CCGATTATTT GTCAATTCAT AATTCTCATT 
    TGTATGTTGA AGAGTTCTAA AATGTACTAT ATAATTTTTC TTTTTTCGTC 
    ATTCCACTAG TTTTTCTTTG TCGGCCGTCA CTAAACTAAT AAATAGTTCT 
    GAGATTAAGA AGATTCGAAT CCTACTATAG TACATTACCA CGTTTACAAA 
    GGAAAAAAAC ATAGTACAGT AGCAATTCAC TAGATAAATA ACCCTATTGT 
    CCCATTACCA CTTGTCACCA TATTGGAAGT GAATCATTGC AACAAACACA 
    AATAGTCATG ACTATCATCA TATGTTGCAG CGGTTAAGTC GTCTTCATTT 
    TATACCTACT GGTGAAAGCA ATAGATAGGT TTTAGTGACT GATCGCTAAT 
    TTAAATTTAA ACATTAAAAT TTCTCAACAA CTAAAACTTT TGTCTTCAGT 
    CACTAAAAAT ATCTTCAAAA ATTTCACTAA ACCATCAATT ATAAAAAAGA 
    AAGCAAGATT TGTAAACGCA GTCACTAGTG GCTGACTATA ACGAAACAAA 
    TAATCAAACG CCTGATTATT GCCGCTGGTC GTTTTTTGTC TTGTGATCTN 
    GTCAGCAACA AACAAGGCCC GAACAACATG CCACGNATAA AAATGGCTTC 
    GAATTTACAT AAATATCGAC AACCGCACAA GAGCNTAAAT GTGCCAGCGG 
    T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23164715 [Map]; Strand: c
      • AT1G62560.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 3
        Distance: 2066; Region: intergenic
      • AT1G62570.1 - [+] show detail - flavin-monooxygenase glucosinolate S-oxygenase 4
        Distance: -4421; Region: intergenic
    Flanking Genome Sequence: 12-5551-1 - 3-prime edge 
    CTTTGAAGGA TATATGCATG ATCGTTCATC GTCAACATTG TTTGATTTAT 
    CAGATTGTCA TCTTATGATA TGCCATTTGA TTGTATCAGG CTATCAGCCT 
    AACCCTCGTT TGAGAGTTCT ATTATGTAAA TGCTAATCAA CNTTTTCTAT 
    TAAAAATCAA CAGTTCCTCA TAAGATTAAG AGTATTAGCC CATATTTTTA 
    TATAATGTCA AGATCTTTGT CCAATTTTCG ATGTAAGATT TTGTTATTCT 
    TAATACGCTC CCTCGAAATG ATGGTTTTCT AACTATTAAT CTTTGTATTT 
    CGGTTAAAGA ACAACGAATA AAATTGGGTC GAGTCGATTG AAGATCCGAC 
    TGAACAACTT ATAAATATGA GCTTCCAACT CAAAACTAAT TAGCAATGAA 
    TGGATTGGAT TTCATATCTT TTATATTCTA TGAAAGCT

AT1G62560.1

Model type
Protein coding
Short Description
flavin-monooxygenase glucosinolate S-oxygenase 3
Curator Summary
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational Description
flavin-monooxygenase glucosinolate S-oxygenase 3 (FMO GS-OX3); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 2 (TAIR:AT1G62540.1); Has 15604 Blast hits to 15117 proteins in 1989 species: Archae - 85; Bacteria - 8709; Metazoa - 1148; Fungi - 1456; Plants - 809; Viruses - 0; Other Eukaryotes - 3397 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62570.1

Model type
Protein coding
Short Description
flavin-monooxygenase glucosinolate S-oxygenase 4
Curator Summary
belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates
Computational Description
flavin-monooxygenase glucosinolate S-oxygenase 4 (FMO GS-OX4); CONTAINS InterPro DOMAIN/s: Flavin-containing monooxygenase FMO (InterPro:IPR000960), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: flavin-monooxygenase glucosinolate S-oxygenase 2 (TAIR:AT1G62540.1); Has 12978 Blast hits to 12465 proteins in 1535 species: Archae - 27; Bacteria - 6311; Metazoa - 1188; Fungi - 1455; Plants - 842; Viruses - 0; Other Eukaryotes - 3155 (source: NCBI BLink).
Link
InterPro Scan - TAIR