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13-0005-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12188954 [Map]; Strand: c
      • AT4G23310.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 23
        Distance: 191; Region: intergenic
      • AT4G23320.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 24
        Distance: 228; Region: intergenic
    Flanking Genome Sequence: 13-0005-1 - 3-prime edge
    ATTATTACAG AGCTCTTCTT TGCCTGTTTC TTTTCCTTTA GTTGGTTCAN 
    ATAATGTGTG CATGTTTAGG AAATCTGGTT CTTATCAACT AAATAACAAG
    TTATATTTTC TACATGAAAG GCCATGCACA TATATTCACG AGTAACNTTC
    ACTCATTTGA ATTATCGTGG GACACGTGAA AACCTTTAGG TTATCCTTCC
    AGACTAATTG ATATTAAGCT ATTCATTTTT GTCAATAATT GGTTTATGAA
    AGAATCTACA TATACAACAT TAGCCTCGCT TTTAACGAGG ACTAACACAC
    GTGACCGATA CAGAACAAGA AAAAGACATG CTAGTAGACG GACCACGCTG
    CAATCTATCA GCTAAGGGAT TTGGCTTGAA TCTGACCCTA AAGACAAATC
    CTGGTGGTTG AGGCACATGT AGAGTAATTG AAGTATTTGT GAGCATATGA
    AAGACTGTAG ACATCGTTGG ACGATCAGCA GGATTTTCTT GAACACATAA
    CAATCCAATG TGAATGCATC TAATGACTTC ATTTCTATCA TAATTCTCCC
    CCATGGGTGC GTCTACCAGT TCCAACAATG GTTCATTGTT CCAAAGCCTC
    CATACCTATT CAAGTCATTT ATCAAGAAAC TAATTTAAAT GTTGAGAGCT
    ATGATCATTT TGCTAAGAGA AGTANAAAAG TTTGAGATGG CATTGGAAAT
    ATACTAACAT ATGTGACTAA GTTACTTATT GAGCCGTCTG TCTCGTTGAT
    GCTACTATCC T

AT4G23310.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 23
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 23 (CRK23); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 19 (TAIR:AT4G23270.1); Has 121765 Blast hits to 118949 proteins in 4447 species: Archae - 102; Bacteria - 13740; Metazoa - 44280; Fungi - 10260; Plants - 35406; Viruses - 410; Other Eukaryotes - 17567 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23320.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 24
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 24 (CRK24); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: central cell, stem, cauline leaf, leaf; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (TAIR:AT4G23290.1); Has 117493 Blast hits to 116145 proteins in 4428 species: Archae - 91; Bacteria - 13531; Metazoa - 43566; Fungi - 10142; Plants - 32571; Viruses - 400; Other Eukaryotes - 17192 (source: NCBI BLink).
Link
InterPro Scan - TAIR