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13-0081-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 254559 [Map]; Strand: w
      • AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-0081-1 - 5-prime edge 
    CCAGTGTCTC ACGGTCGTCT GCTCCACCGA GGAATATTGA ACAGATGTTG 
    ATTCTCATTG AGCCGTTCTT CATCGCCGTT CCCATGTTCT TGAAATCTGG 
    AAGCCGTCCT TGGTCCATTA GAACCGCAAC NGGAGCTAGG TGAGGCATTC 
    CGGACGTTGC GACAGAGCCT TCGTTCTGCT GCAGTCCCGT CGGCCATCCC 
    GACAATGATG AGATCGGTTT CTTTTTCGAA GGCCAAGGCA CATACATCCT 
    CGTGCATCGT CTTGCTCGGT GCAACTGCTG TGAAACATTC AACGGAAACG 
    TTTTCTTGCA AATCGTGGCC GCTTCGGAAT TTCTCGAAGG CTTTGGAGAT 
    CTGATCTCTG CGGCTGGAAG ACGTTGATGA CTCGTCGTTG TGACCTGGAT 
    GGTGTTGAAT GAGGAGAGGG ACGTTATTTT GCTCAAGCTC TTCAAGATTA 
    ACGGAAACGA TGGAGAGCGA AGAGGCGCTC GAGGGACAAG TAGAGAGCTC 
    CAAGACGGTG AGGATGGGAG GAACGGTTTC ACGGTGGTAG AAACAAGTGA 
    GGATCTTGAG AGGTTTGTTT GGTTCGTAGT GTTGAACGGT TTGTCGCCGG 
    TAAGTGATGT GTTTCCTCTG CNCCCACCCN NANAGATTTT TGACNATGGC 
    CGNGAAAATG GTCNNAGTGA ACCATGGNNN NANATACCAT TNNNCNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 254483 [Map]; Strand: w
      • AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-0081-1 - 3-prime edge 
    NTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTTGCGGTTA GAATGACAAA CCAACCTTAC GTAAACCTAA CCGTTCTTAA 
    ACTTGTCGAC GGTGAAAACG TCTCACACCT GAACGACGTC GTAGAGAAAA 
    GACTCGATTT CAGAACCATC GAAAAATTCC GTCAAGACAC CATGAACAAA 
    CACAATGTCG CTTTACGAGA GGTAAACACA CAAGTCTTGA CTCCGTTTCT 
    CCGGTTTTCA AATCCGGATT AGATTTAACC GTTCATTTTG GTCTTAGGTA 
    TGGATAAAGG AAGCGAGTGA TCTGGTGAAC CTACTGAGAG AGGAAGGTAA 
    CAATTACGAT CTGATCATGG TTGGAATCAG ACACGAAAAA AGTTTCGAAG 
    TGCTTCAAGG ATTATCGGTA TGGAGTGAGA TCGAGGAGCT TGGAGAGATC 
    GGAGATCTGC TCGTTTCCAG GGATCTCAAG CT

AT5G01680.1

Model type
Protein coding
Short Description
cation/H+ exchanger 26
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 26 (CHX26); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 27 (TAIR:AT5G01690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR