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13-0096-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21919128 [Map]; Strand: c
      • AT5G54000.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: -64; Region: promoter
    Flanking Genome Sequence: 13-0096-1 - 5-prime edge 
    NNGNANNACT NAGGGCCANG GATCGGATAN GNCNCNCAGT NCCATGTANN 
    CAGCGATCTG ANNTGAGCGN ATCGTGCATA TNGGCNGGAT TATTCTAGAC 
    CATGNTGATN ATGCNNCANN NAANNTGNTN CACGCTGNNN AANNNAANCT 
    ANNAGACNGG NCNGTAGGNN GCCCCNGCCT GNNTAAAAAC TACCGGAAAG 
    ATACCTCTAC ACACCCACCG GCGACGGCGA AGGTGATCAA CCTTTCAATG 
    GTTTGTTGCC AGAGATGAAA ATTTCGATCA TCGATCTTAA TCTCCTTTTC 
    TCTTCTTCTG ACGACGGTCG AGAAGAGTTG AGTAAACTTC ACTCGGCGAT 
    CTCTACATGG GGCGTTGTTC AGGTTTAAGT TTTTGACCCT CTTAGTGATG 
    ATCATATAGT CTTAAAAAAT CATCGAAGAA ATTTTATATC TCGTAGGTGA 
    TGAATCATGG AATTTCAGAA GCCTTGCTCG ACAAGATTCA CGAGCTAACG 
    AAGCAGTTCT TTGTACTTCC GACCAAAGAG AAACAGAAGT NCGCAAGAGA 
    GATAAGTAGT TTTCAAGGAT TTGGAAACGA CATGATTCTG TCTGATGATC 
    AAGTTCTCGA TTGGGTCGAC CGCTTGTACC TCATTACGTA CCCTGAAGAT 
    AACGACAGCT TAAATTCTGG GCCTGAAAAT CCAGCCGGAT TTAGGTAAAA 
    TCCATAGGAT CATNCATGCC NTAGATTTCA GTTT

AT5G54000.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G20400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR