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13-0144-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30129131 [Map]; Strand: w
      • AT1G80080.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G80090.1 - [+] show detail - Cystathionine beta-synthase (CBS) family protein
        Distance: -973; Region: promoter
    Flanking Genome Sequence: 13-0144-1 - 5-prime edge 
    CTCCCTCAGA ACCAGCGTTT GCAGACTCGA GCCGAGGCGT CCCAGAAACG 
    CCGGTATGCG CTGTGGGGCG CGGCCTAAAC ATCGGTAGAA GAACAAGGCT 
    TTGAGGTGTT TGAGCCTCGT GAGGGACTCA GAGACGTAAG AGCGTTGTGG 
    ATCACAAGTC GGAAACGCCG TGTCGTCTGA GAGCGCTCCG AACGACAGAG 
    AGACCACGTG GTAGACGTTA TCCTGGTCCG GCATACACTC GATCCCGTGC 
    CATCTCCCTC GGCAAACGTC TGGAATCGCG GCAGCCCAGT CGTTGCCGGT 
    CGCACGCATA ATGTCGTAGA CGGCGTCTTG CTCGTCAGGC TCCGTGCGAG 
    CGCCGTCATT GGTCATCGTG AATCCAGTTT GTGGGCCGTC GATCAGAGCA 
    GATGGGGCCG TCGAGTCGGA GGTGATCACA GTGAAAGATC TGACCAACGG 
    AGAAACTATA GACAAGACAA TGAATATTTG GCGGAAGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30129015 [Map]; Strand: w
      • AT1G80080.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0144-1 - 3-prime edge 
    TGAGGGAGAA TGGTTTTTTG GGACCTATCC CTGACGAATT GGGCAATCTC 
    ACCAATTTGA AAGTTCTTGA TTTGCATAAA AATCACCTCA ACGGCTCCAT 
    TCCCTTGTCG TTCAACCGGT TCTCCGGTTT AAGATCGCTT GATTTGAGTG 
    GTAACCGGTT GACTGGTTCC ATTCCCGGTT TTGTTCTTCC GGCGCTGAGC 
    GTTCTGGATT TGAACCAGAA TCTTTTAACC GGACCGGTTC CACCCACACT 
    CACAAGCTGT GGATCGTTGA TCAAAATCGA TCTTAGCCGA AACAGAGTCA 
    CTGGTCCTAT CCCAGAATCG ATTAACCGGC TCAACCAATT AGTGCTTTTG 
    GATTTGAGCT ATAACCGGTT ATCAGGTCCA TTCCCGTCTT CTCTCCAAGG 
    CCTAAACTCT CTTCAAGCT

AT1G80080.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.
Computational Description
TOO MANY MOUTHS (TMM); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 29 (TAIR:AT2G42800.1); Has 88991 Blast hits to 28047 proteins in 1079 species: Archae - 16; Bacteria - 3330; Metazoa - 23111; Fungi - 805; Plants - 56845; Viruses - 0; Other Eukaryotes - 4884 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80090.1

Model type
Protein coding
Short Description
Cystathionine beta-synthase (CBS) family protein
Computational Description
Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G15330.1); Has 517 Blast hits to 517 proteins in 144 species: Archae - 0; Bacteria - 47; Metazoa - 83; Fungi - 146; Plants - 195; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR