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13-0146-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29341397 [Map]; Strand: w
      • AT1G78030.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unkno...
        Distance: -760; Region: promoter
    Flanking Genome Sequence: 13-0146-1 - 5-prime edge 
    GGTCNNTNGA CTGNNNCCNA CANNTNANAN NANCNCATCN GCNNGCAGGA 
    GNNNNGACCN GGAANACTTA CNNAGGACCT CGGANNACNC AGTGCAAATA 
    TGCCATNNAT TAATNNATTT TTNCTAATCC AGTTGTACAA TAAATGTTAT 
    GATCCTTTTT ACTTCGAGTC TAATATAGGG TTTAATGATA TAATACAAGG 
    TTAAGTACAC TTGAGAAAGG CTAAAAAATG TACTTTATTC AATCGCATTA 
    GTGCGCTTAT GAGTTATTAG TACACATCTA CGAACGGCCG TATATTTCTT 
    TCCGTTTGTA TTAAGGCAAC ACAATAAAAT AACACTCACG CATGTTATTT 
    CGCCTTTATG TCAAACTTTG ATTTAGTTTT TTTTTNGATC TTACATTATT 
    TATTTAAAAA TTTCAGTAGN GTCGGCCCGT TTTNTNAATT ACGGATNGAA 
    ATGTNCCATC CAAATTAANC AAANANAAGG GGGAACAGCT CATGCGAGGG 
    NCCGAATNAT ATAGCTTTCT AAANGGNGCA TTTAATTCTT AGTTTGGGAC 
    TTTAACAATA ATNCCACCGT ATGTTTNTTA ANAGNGNNCA TTAAAACAAA 
    ACATACTNAN GGGGGNTTCN AAATNATTTT TAATNCTTGA NCNGATTAAA 
    ATNTTAACTT TCNAACNCCC CNCTTGCTTA GGGNTAAAGG NCCNCNATTN 
    GGNTTTNGGN A

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29341291 [Map]; Strand: w
      • AT1G78030.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unkno...
        Distance: -866; Region: promoter
    Flanking Genome Sequence: 13-0146-1 - 3-prime edge 
    CATAGAGTAA CGGGACAACT TCTTATTCCT TGTCCCCTCC TAAAAAACAA 
    AAAACCATAC ACATTAACAC ATATATAGCT CAAACTCTAT TCTATTTGTT 
    ACTATGTCAG CCAACACTTT TTTCGAGTTG TTAGCTCATA CTTCTCTTTA 
    GCCATATGAT CATTTTGTGA AAACATGCAT ACTTAGCTTG TTAATCTCCT 
    TCAGAAAGCT

AT1G78030.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT4G37900.1); Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR