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13-0166-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17214336 [Map]; Strand: w
      • AT4G36460.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: -1237; Region: intergenic
      • AT4G36470.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 691; Region: intergenic
    Flanking Genome Sequence: 13-0166-1 - 5-prime edge 
    ATGCTATTCA CACAAACAGC CGACATATAT TTTTAAAAAC TTTTAAATTA 
    GATTTTTTTA ATATGTTTTT AAATACAATG TTTCCTTAAT AAAATGCTAT 
    TCATTTATTT AACCCACTTT GGACAATAAT GTCAAGTTCT AATTTTCTAA 
    ACAGGACGTT ATTATTTATT TGACGAGTTT GAACAAAATA AACATCATCT 
    AGTCAGATTT TAATACAAAC CAAGTGTCGT GGAGGTTCCT TGATTTGTTT 
    AATTCTCCTC TAGTTAGATT TTAATATATA AACCGAGTGA GACTCGTCAC 
    TCGTGGTCCG TGCCTCCGTG GAACCCATGA TAAACTTATA AACTTACTCG 
    TGGTCGNGTG TTTAACTNTA TAGTCCAGCG GAAACGATGC CGTGCAATGG 
    AAAAATATCA ATNGCTTATC TCCGTTAGTT TACGTGGAGC TTAAGGNAAA 
    CTTCCCCAAT CGGAAAATTC CAAAANCCCC ACAATAAATA NATCNNAATT 
    TNNCNGGATC TCCTNCTTAN CTTACTNNAA ACTGGNGANA ACANCCTTTA 
    GAGTNCCGAT AAAAACNTGN NTNTTNGNGC NGNNNNANNA AANNANNGNN 
    NNNNNAGGGN NAGAGANNNN GGGAACANNG NNGCANTAAN ACAANAACCA 
    ANNGNGTNAA NTNAAGNTNG ATNGGCNCNN GNCNAGNNAA NNANNNCNNN 
    NTTTGNANAT ANCANACANC ANTNCAGNNA NANNNNCACN ANNGGACTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17214266 [Map]; Strand: w
      • AT4G36460.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: -1167; Region: intergenic
      • AT4G36470.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 761; Region: intergenic
    Flanking Genome Sequence: 13-0166-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATATA 
    GCATGATTAT GGAATATATT TTTTGTCGAA AAAGTAGTAT TTGTCATCTA 
    GTTGTAAAGA TATATTTCTG ATTTTTCAAA CTTTTTTAGA TC

AT4G36460.1

Model type
Protein coding
Computational Description
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G36470.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Link
InterPro Scan - TAIR