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13-0177-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30058305 [Map]; Strand: c
      • AT1G79915.1 - [+] show detail - Putative methyltransferase family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 13-0177-1 - 5-prime edge 
    GGTTGAAACG AACGANAAGC TNTAAAGTGA TCCAACTATT ATTTACCTTG 
    TCACAACCGA ATGACATTAC TCTCCTTAGC ATGCGTAAAT AACTGCAATG 
    GGTNAGATCA TCGGCTGNAG ATCACATCTG CCGCGAAAAT GAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1568830 [Map]; Strand: w
      • AT3G05430.1 - [+] show detail - Tudor/PWWP/MBT superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-0177-1 - 3-prime edge 
    GNNTNNNNGC GTCACNATCG GNNTCAACAA CCCNGANNGT GGAACCAGAA 
    NNNTCTCAAN GGNATNNAAN ACANTGCCAG GATNGCTGAA AGATGAATCT 
    ACCTCAGAAG GGGTGCTCTA TTAAGTGGTT CTTGTGTCTT CACTAAACAG 
    TATACAGATC TTGCCCTAAA AGCTACNAT

AT1G79915.1

Model type
Protein coding
Short Description
Putative methyltransferase family protein
Computational Description
Putative methyltransferase family protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); Has 424 Blast hits to 423 proteins in 116 species: Archae - 0; Bacteria - 1; Metazoa - 170; Fungi - 70; Plants - 129; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G05430.1

Model type
Protein coding
Short Description
Tudor/PWWP/MBT superfamily protein
Computational Description
Tudor/PWWP/MBT superfamily protein; CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT5G27650.1); Has 708 Blast hits to 664 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 463; Fungi - 18; Plants - 206; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Link
InterPro Scan - TAIR