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13-0200-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8127318 [Map]; Strand: w
      • AT5G24040.2 - [+] show detail - Protein of unknown function (DUF295)
        Distance: -285; Region: promoter
      • AT5G24040.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0200-1 - 3-prime edge 
    ATCAGACCAA GTCTATAATC ACTCAGAGAA TAAAATGGTA AAATGGTCGG 
    AGTTGCCACC GGAGATTCTC CACTTGATCT CCCTAAAAAT CGACAATCCC 
    TTTGATCTGA TCCACTTTCG GTCAGTTTGT TCCTTTTGGC GATCCTCTAG 
    TCTCCTCAAA TTCAGACACA TGACATCACT TAGATGTCCT CTTCCCCTTG 
    ATCCCGGCGG TTGTGGTGAT GATTGCCATA TCTTGAGCAG CCGTGTCTAC 
    CTTCTCAAGT GTCCTAATCG TGACCGTCCC CAATATTGGT AATAAAATCT 
    GTTTCTTGTA TTGATTCTTG AATCTTGATG ATACATAGAT GATAATTTTC 
    TCCTGCCAGG ATGTTTAAAC TACAAGCTAA AGAGAATGGA GAAGTTGTTC 
    TACATAGTTT GTTCTTAAGA AGAAACTCCT CTGCGTATGG ATGCTTGTAT 
    CCAAGTCTAT CTATTGATTT GCTCAATTGT CAAATCTTTG AGCTAGCGCA 
    AGAACATGTG GCTTGTTACA GCGAATGGTT TGAATTATTT GAATGCATTT 
    CAAAATGTGA AGAACGTATC GGATTTATGG GTCTAAACAG AGAGAAAAAC 
    GAATATATGA TTCTAGGGAA GCTCTCATTC AATGGTCTCG CAATGTATAG 
    GTCAGTCGAT AACCGTTGGA CTGAGCTCGA GATAACACCC GATTCATTTT 
    TTTGAAGGGA TAGTTCCATT TAAA

AT5G24040.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G16290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G24040.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G16290.1).
Link
InterPro Scan - TAIR