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13-0233-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8126663 [Map]; Strand: c
      • AT5G24040.2 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon2 (CDS)
      • AT5G24040.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0233-1 - 5-prime edge 
    TGTGNANGTG NGATAANAAC AATGCCTACT NGCCNTGNGG ANCGAACAAA 
    TCCANGCCAA TGAANAGNAT ANGTACTNTT CTGGNGNNGG ATATACNGNA 
    CATATTAGNG CCNATCCAAN NAANTACGGA NCCCTGNNCC NCTAAANACG 
    NATNCNTTNN AGCGGNCAAG ACCTTGTGAT AAGACAAGGA AACGTTGGGT 
    ANGGAGACNA CCAACATTTT TATATCTTGT ATTTCATGCA ACTTGGAACA 
    AAACTAAAAT TTACAAGTCT TTTTATTTCA TTCGTTATCT CCAACAGCTT 
    TTAATGACAG GGGACAAACN ATATTCTCGT ANAGATGTGC ACAAAGAGCC 
    GATNCNATTT TCACATACCA AATATNCGNG AGAAAAAAAN ATGGNTNGAA 
    ATATCNNAGT TNAACNAGGG AAGAAANNAT TGGGATCAGT GGAAAAAATT 
    NGACNGGCNN NNGTNGGNNT TGGANNNNAT NGNNNNTTNT NANNCNNGGN 
    NNCNGGAAAN NNNNGGGNNN NGGGG

AT5G24040.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G16290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G24040.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G16290.1).
Link
InterPro Scan - TAIR