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13-0285-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28386286 [Map]; Strand: w
      • AT1G75590.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -2518; Region: intergenic
      • AT1G75600.1 - [+] show detail - Histone superfamily protein
        Distance: -4379; Region: intergenic
    Flanking Genome Sequence: 13-0285-3 - 5-prime edge 
    TTAAANNAAA TTTAANAACG GGNAAAACTA ACAAANCGGT TATNCGATAA 
    CGGTCGGTAC GGGATTTTCC CATCCTACTT TCATCCCATA TCACATTTTC 
    CGCATGTGGC ATGATAATAA CCTTATGATA TACTATTCGC TTATCATATT 
    ATTTAAGTCG AATACTCATA TATATATACA TATATGTTTC ATACNTGAAA 
    TTATAGTTTG ATATAGATGA TTGAATTGCC CTATTTCAAA TCTAAATATT 
    GAATAAATAG TATTAAAAAA AAATTGAAAT AAACAAAGGN GGGTCCAAAT 
    GCATGTTATG GATGCATCCC CCCCATGCGA CGTTACGTTC TCACCCCACT 
    TGTTACGTTT TAAGGATCTT CTCATTNAAT TTTATCTTCC TAAGCAAATC 
    TTCATTAATG CTTCTGCAAA TTTTTATTAT TATTGGTTAT AATGAATCGA 
    ACTCAATTAT TTAATTTTTC TCCATAAAGA TATAATTACA AGANAGTCGA 
    TCGTTTGCTA TGAATCGGCA ATGGATTGTC TCTTTCTGCC TCCATGCACC 
    AAATTGCATT AACATGCNCG CACAAATTGA GGAAATGAGT NTATTATATG 
    GGATCAAACA ATAAATTAAT CGCTAAATTT GNTTTCNATA GGACACAANT 
    CACATCAAAT AAAAATCNTT GNATAATGNC ATNNGNGGAA NCACANTATC 
    CTTATAAATC CTNNANNNNA ANCATTATAC NTTNNTNTTG NNAANNNAAN 
    NCNTNNANAG GNNNNAGNNN NAAAAAAAAA NAAANNNACN

AT1G75590.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT5G10990.1); Has 1416 Blast hits to 1399 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1415; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G75600.1

Model type
Protein coding
Short Description
Histone superfamily protein
Computational Description
Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: root, flower, leaf, pollen tube; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 14606 Blast hits to 14598 proteins in 7248 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2033; Plants - 1270; Viruses - 0; Other Eukaryotes - 700 (source: NCBI BLink).
Link
InterPro Scan - TAIR