Home
Mutant Lines
13-0297-1

13-0297-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 4107465 [Map]; Strand: c
- AT3G12900.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
  Distance: 1353; Region: intergenic
- AT3G12910.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
  Distance: -1910; Region: intergenic

TCCCTATGTT TGTTACTTCT ATTTTACATC AGAACTAGAT TAGTTAATAT 
TTTCTCTGTA CGTCCAATTT TATAAATATT TTGGCTACAA ACACACATAT 
TAAGAACTTT GTTTTACTTA CAAAAATAAT TTAATATTTT AGTTAAAAAA 
ATAATAATAA AGATAAAAAA ATGATCACAA AATATTAAAA GCGTTTAAAT 
TTATATAGAA AATGTAAGAT ATAAAGTATA TCTAATAGAA TGAAACAATA 
TTAAGATAGT ATTAGTTCTT TTTAACATTC CAATGAAATT TGATAATGTT 
TGTACCGGAG AATGATTCCT TCTCTAATTT TTTTTTTTAA ATNAAAAANA 
AATTTTNTAG TTCTAAACAT GTNCATNTTT NTCATNTNGG GGATTAAAAT 
NTTANGTNNG ATTTTCTTCT AAATNCCATT CNAAATCAGG GACTTTTAAA 
TTTTNTTTAA AANATTTNAC NCGTNGGGCT NTTTGTACCG GGTNCTTTTN 
CCAAAAGCT

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 4107349 [Map]; Strand: c
  - AT3G12900.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: 1237; Region: intergenic
  - AT3G12910.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
    Distance: -2026; Region: intergenic
Flanking Genome Sequence: 13-0297-1 - 5-prime edge
```
CATAGGGAAG CCATGGAAAC GAGAGTAATT TAATACATGA ATT
```

AT3G12900.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G55290.1); Has 8653 Blast hits to 8615 proteins in 1001 species: Archae - 0; Bacteria - 1126; Metazoa - 119; Fungi - 1049; Plants - 4930; Viruses - 0; Other Eukaryotes - 1429 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G12910.1

Model type: Protein coding
Short Description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 42 (TAIR:AT2G43000.1); Has 2920 Blast hits to 2915 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2920; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR