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13-0311-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27836608 [Map]; Strand: c
      • AT1G74020.1 - [+] show detail - strictosidine synthase 2
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-0311-1 - 3-prime edge 
    CCTAAACCGG TATATGACAG ATTGCTAACG TAAGCCGATA AAAACAAGGA 
    ACTAAAAAAG GTTGCTTTTC GTCCACTCGT CCCTACATGA ATT

AT1G74020.1

Model type
Protein coding
Short Description
strictosidine synthase 2
Curator Summary
Encodes AtSS-2 strictosidine synthase.
Computational Description
strictosidine synthase 2 (SS2); INVOLVED IN: response to jasmonic acid stimulus, response to wounding; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT1G74010.1); Has 965 Blast hits to 955 proteins in 193 species: Archae - 1; Bacteria - 188; Metazoa - 217; Fungi - 5; Plants - 466; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
Link
InterPro Scan - TAIR