Home
Mutant Lines
13-0344-1

13-0344-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 2559739 [Map]; Strand: w
- AT1G08150.1 - [+] show detail - Cation/hydrogen exchanger family protein
  Distance: -665; Region: promoter
- AT1G08160.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
  Distance: 0; Region: exon1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GGTAATGATC AACGTTACAT CAAGCTCGTT GGATGGATTC CAGAGAGTGT 
TATGCAAAAC TCGTCTTTAG TTTGATTTAT CCTCATCTTG AATTGGTTTC 
ATTTGTGTGC AAAATTTGCT ATATGTGACA TTGATTGATT GTGTGTGTGT 
TTTTCCTTTT TAAATTTCCT CTTTGGTTTT GTTCTTTTCT GCCAGTCATT 
CCATTTCTCT TTTCTTTTCA TCATTAATTA TTATATTTTT TATTTTTTTG 
GGCTTAAAAT GCTTTACATT TTTATTGCTC TGTAAGTGAT TCGATTTTTA 
TTTCTAATAA TATATGACGA TTTAATAACT TCATCAAGAT TTTTATAACG 
TAAGATTACA TGCAAAATCC GTATATGTCG GGATCTCTAA CAAAACTTGG 
ATAGACACAA ATTGATGGAG GTTCTTAAAT AAGCAGAGAG GTAAAACAAA 
CATATAAATT AGTCGCCAGG TACGTAAACA GACAGTTAAC AACAACANGA 
TAAAAAAAAA AANNGGNNAN NNNCAANAAT TNNCCCCCTT TTTTTNGNGG 
GGNAAATTTN TTNNAAAAAA ANANTGNNNC CCCAAAATTN NGAAATTTTT 
TNGGAAAANG GAAAANCNCN TTCTNTNGAN CTTTTTNTTT TNTNNAAAAA 
AAAAAAAANN NTNGNAAAAA TGGGNNNNNN TTNNNNGGGN NNTAANGGGG 
GNNNNNNNCC CACCCTTTGG GGGGGATT

AT1G08150.1

Model type: Protein coding
Short Description: Cation/hydrogen exchanger family protein
Curator Summary: member of Putative Na+/H+ antiporter family
Computational Description: ATCHX5; FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 6A (TAIR:AT1G08140.1); Has 2700 Blast hits to 2678 proteins in 819 species: Archae - 128; Bacteria - 1881; Metazoa - 0; Fungi - 113; Plants - 529; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08160.1

Model type: Protein coding
Short Description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G22870.1); Has 611 Blast hits to 611 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 611; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR