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13-0367-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3810714 [Map]; Strand: w
      • AT1G11330.2 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G11330.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0367-1 - 5-prime edge 
    CTCCCATCAA CGACACTTCC GGTGTTATCT CGATCTATCA AGATGGAAAT 
    CTCGCGGTTA CCGATGGTCG AAATCGCCTT GTATGGTCGA CGAATGTCTC 
    AGTACCAGTA GCCTCCAAAT GCTACTTGGG TTCAGCTTAT GGATTCTGGG 
    AATCTTATGT TACAAGACAA CAGAAACAAT GGTGAGATTC TTTGGGAGAG 
    TTTCAAGCAT CCTTATGATT CTTTCATGCC AAGAATGACT CTTGGCACCG 
    ACGGTAGAAC TGGAGGTAAC CTAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3810598 [Map]; Strand: w
      • AT1G11330.2 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G11330.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0367-1 - 3-prime edge 
    GNTGGGAGAG NCTNTGCTAG NAACCCAAAC CANAGNTTGG ATTGGAATCT 
    TTTCGTACCA AATCCCAACA TAACGTAACC GAGTAGTGGA ATTAACAGGA 
    GTGAAGAA

AT1G11330.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1); Has 124566 Blast hits to 122714 proteins in 4439 species: Archae - 108; Bacteria - 13570; Metazoa - 45533; Fungi - 10903; Plants - 35507; Viruses - 467; Other Eukaryotes - 18478 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11330.2

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1).
Link
InterPro Scan - TAIR