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13-0402-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163121 [Map]; Strand: c
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -833; Region: promoter
    Flanking Genome Sequence: 13-0402-1 - 3-prime edge 
    CACAAGAGTA GAAGACTTGT ACCGCGCATC CGCATGATGT TGTCAAGTTG 
    AAAATTGCTT ACAAAAGTCC TGTTTTTTTC AACCTAGAAT CCATTTCCCA 
    CAAAAGTTAG CACCTTTTAT CACTATTATT TTCCTTTTAA ATACTAGGGA 
    CCCTCGATAT AATCTAAAGA GCGTTAGGTT TTTGTAAAAT ACAATTTTGG 
    AGTTTATGGT CATATTTTTC TTTTCTTACC TCTTCTTTAT TATTTCGTCT 
    TGTTTATATT TTAGTAAGTC TAAAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 163005 [Map]; Strand: c
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: -949; Region: promoter
    Flanking Genome Sequence: 13-0402-1 - 5-prime edge 
    CTCTTGTGGA CCATATTAAT GCTTTGATTA GATTGATATA ATACTCATGC 
    ATTATAAGCT

AT2G01340.1

Model type
Protein coding
Curator Summary
Encodes a protein whose expression is responsive to nematode infection.
Computational Description
At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR