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13-0450-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1018488 [Map]; Strand: w
      • AT1G03970.1 - [+] show detail - G-box binding factor 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0450-1 - 5-prime edge 
    GATTCAAAGC CCTTCGAGAT GGCGATTGAT GTTGATCGGA GTATCGGAGA 
    TCGGAACAGC GTTAACAACG GAAAGAGTGT TGACGATGTT TGGAAAGAGA 
    TTGTATCTGG AGAGCAAAAG ACGATCATGA TGAAGGAAGA AGAACCAGAA 
    GATATGATGA CACTTGAGGA TTTCTTAGCG AAAGCAGAAA TGGACGAGGG 
    AGCTTCAGAT GAAATCGATG TGAAGATTCC AACGGAGAGA CTCAACAACG 
    ACGGTAGCTA TACATTTGAT TTTCCGATGT TGCAGCGACA CAGTTCGTTC 
    CAGATGGTTG AAGGATCAAT GGGTGGAGGA GTAACGAGAG GAAAGAGAGG 
    GAGAGTGATG ATGGAGGCAA TGGATAAAGC TGCAGCTCAG AGACAGAAGA 
    GGATGATCAA GAACCGTGAA TCCGCTGCTA GGTCTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1018372 [Map]; Strand: w
      • AT1G03970.1 - [+] show detail - G-box binding factor 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0450-1 - 3-prime edge 
    TTTGAATCAG ACGCGAAAGT GTAATCGTTG ACTCCTCCGC CGTAAGCGAA 
    ACTGATTCTG GAGTGATCGG CGTGAGGATT TGGTCGGAGA TGGTGCGATG 
    ATCTTATAGA AGGGGAAGAT GAAGCAGAAG AAGAATTACN GGCGAGACAA 
    GTCGGAATTG GAAGAAGACA TCAACTTGAA GGACGCCATT TCCGGAGCTC 
    ACTGGAATTG GAACGAATTT TTATCTATCT GGGTTTTGTC AAAGAGAAAG 
    AACAATCGGA AATGGTGGAT TTTCTTCGAA CCAGAGATCG AGAGAGATC

AT1G03970.1

Model type
Protein coding
Short Description
G-box binding factor 4
Curator Summary
encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.
Computational Description
G-box binding factor 4 (GBF4); FUNCTIONS IN: sequence-specific DNA binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT5G44080.1); Has 1357 Blast hits to 1357 proteins in 128 species: Archae - 0; Bacteria - 6; Metazoa - 355; Fungi - 8; Plants - 931; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Link
InterPro Scan - TAIR