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13-0521-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30348545 [Map]; Strand: w
      • AT1G80750.1 - [+] show detail - Ribosomal protein L30/L7 family protein
        Distance: -256; Region: promoter
    Flanking Genome Sequence: 13-0521-1 - 5-prime edge 
    GTNAGACCNA ACCAACAGGT GACTNANCGA TTCACAACNT TCGNCGTACA 
    GNTTTCATGA TTTGTCCTTC TGATGATTTC AATAAANTAA AAACTGANTT 
    GAATCANCCA TCTGATGGAG AAATNATGCA TCCCATGTNA TNAAAAGAAA 
    CAATATNNCN CAAGATATTA TAAAATAAAA CTAGGTATAT TCAAAGGCAG 
    TAAGGCCTTA CATAAGCCCA TAAATATTGG GCTTTTTTAG CCCAATAGTA 
    TTATGAGTCT GGCCCGGAGC GTAATTAGGT CTGGNGGCAA TGTTGTTAAT 
    AACACAAAAG AGATTTTAGT TAATAAACCC TAGGCTTCTC AAATCGGCCA 
    TTGCTACCAA CTTCGACTTG GAATT

AT1G80750.1

Model type
Protein coding
Short Description
Ribosomal protein L30/L7 family protein
Computational Description
Ribosomal protein L30/L7 family protein; FUNCTIONS IN: structural constituent of ribosome, transcription regulator activity; INVOLVED IN: translation; LOCATED IN: cytosolic large ribosomal subunit, nucleolus, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L30, N-terminal (InterPro:IPR012988), Ribosomal protein L7, eukaryotic (InterPro:IPR005998), Ribosomal protein L30p/L7e, conserved region (InterPro:IPR000517), Ribosomal protein L30, ferredoxin-like fold domain (InterPro:IPR016082); BEST Arabidopsis thaliana protein match is: Ribosomal protein L30/L7 family protein (TAIR:AT3G13580.1); Has 1152 Blast hits to 1152 proteins in 343 species: Archae - 126; Bacteria - 0; Metazoa - 424; Fungi - 213; Plants - 191; Viruses - 0; Other Eukaryotes - 198 (source: NCBI BLink).
Link
InterPro Scan - TAIR