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13-0530-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1050235 [Map]; Strand: c
      • AT4G02390.1 - [+] show detail - poly(ADP-ribose) polymerase
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-0530-1 - 5-prime edge 
    CTTCTTAGTG TCTTCTGCGA TAGCCTCTTC AAGCCTCTCC ACCTACACGA 
    AACACCCAAT AAACAAATTC GAATATCAAC AAAATAGAAA GAGTATTTCA 
    ATGCAATTCA GAGAAATACC AGAGCGGCTT TGACTCCGGT AGTACTGAGT 
    CCACGCTCGG CGAGTTGTGA ACGGAGTTCG TCGACTTTGA GCTTGTTCGC 
    CATTTTCGTC TTCTTTTTCT GGTGAATAGT TCGTCTGAAA GGGAATGAGA 
    CTGAGGAAGT AAGAACGGTT CTATGGTTTT CGTCANAAGT GAGTTCGCGC 
    GAGCATTTGA AGAGTCTTCT TCTTCATCAA TGGCTTCCCT TGAAAGCT

AT4G02390.1

Model type
Protein coding
Short Description
poly(ADP-ribose) polymerase
Curator Summary
Encodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification .
Computational Description
poly(ADP-ribose) polymerase (PP); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity, nucleic acid binding; INVOLVED IN: protein amino acid ADP-ribosylation; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), WGR (InterPro:IPR008893), Poly(ADP-ribose) polymerase, regulatory domain (InterPro:IPR004102), Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 1052 Blast hits to 1033 proteins in 170 species: Archae - 0; Bacteria - 15; Metazoa - 556; Fungi - 107; Plants - 166; Viruses - 5; Other Eukaryotes - 203 (source: NCBI BLink).
Link
InterPro Scan - TAIR