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13-0586-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12511512 [Map]; Strand: c
      • AT4G24080.1 - [+] show detail - aldolase like
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0586-1 - 5-prime edge 
    CAACCAGCGG CTTCGATTGC TCGAATGCAG TGAAGCGCTT CACGAATCCC 
    GCCGGCACCG TGCTCAAGGT AGACGACAAT GAAGTCAAAT CCAGCTCTTG 
    CAGCGATCTC TGCAAGCTCC GGAGAAAAGG AGAGAAGAAA GTGGCCGAGA 
    AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12511628 [Map]; Strand: c
      • AT4G24080.1 - [+] show detail - aldolase like
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0586-1 - 3-prime edge 
    GCTGGTTGCT CCACTGTCCT CCGTGTACCC GACATTAGTC AGGCTTGAGC 
    TAAGAAAGCG TTAGATCTCG GACCCGACGG CATTATGTTC CCAATGGTCG 
    AAACCGGAAG ATCTGCATCC GAGGCGGTCT CGTTTTGCCT GTATCGTCCT 
    GACGGTGTTC GCGGCTGTGC TTACTCCGTT GTGAGAGACT CCAGCTTCGG 
    ATTTAACGAA GGGTATTTGG GTAATTACGC NTGATAAGCT CTTCATTATG 
    TGCCAGGTTC GATCCTCAAA TCCCCTTTGA TTTTCAATTT TATTGGACGA 
    AATTGTTAAA TTGAATT

AT4G24080.1

Model type
Protein coding
Short Description
aldolase like
Computational Description
aldolase like (ALL1); FUNCTIONS IN: carbon-carbon lyase activity, catalytic activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: sporophyte; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), HpcH/HpaI aldolase (InterPro:IPR005000); BEST Arabidopsis thaliana protein match is: Phosphoenolpyruvate carboxylase family protein (TAIR:AT4G10750.1); Has 3952 Blast hits to 3952 proteins in 838 species: Archae - 22; Bacteria - 2525; Metazoa - 2; Fungi - 198; Plants - 35; Viruses - 0; Other Eukaryotes - 1170 (source: NCBI BLink).
Link
InterPro Scan - TAIR