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13-0617-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25801208 [Map]; Strand: w
      • AT5G64540.1 - [+] show detail - unknown protein; Has 2125 Blast hits to 1062 proteins in 182 species: Archae ...
        Distance: 0; Region: exon1 (5UTR)
      • AT5G64540.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT5G64540.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT5G64541.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -106; Region: promoter
    Flanking Genome Sequence: 13-0617-1 - 5-prime edge 
    GNGCTAANCC TANAGCTCGA AATCGGAACT TAAATCATAA TCACATACCT 
    AAAAGAATCG TGATCGAGAA GCTAATTCGT CTTCCTCTGG NTCGATAGCA 
    TCACGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25801094 [Map]; Strand: w
      • AT5G64540.1 - [+] show detail - unknown protein; Has 2125 Blast hits to 1062 proteins in 182 species: Archae ...
        Distance: 0; Region: intron1 (5UTR)
      • AT5G64540.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (5UTR)
      • AT5G64540.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (5UTR)
      • AT5G64541.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -220; Region: promoter
    Flanking Genome Sequence: 13-0617-1 - 3-prime edge 
    TNGAGANCNN GCCGNACGGA ATNANNAGNN NGGNNCGTGT GACCACACGT 
    GNCTANANNC CTAGGTTTTG ATCGGAAATT TCCGTTCTTC TTCTTCGTTT 
    TCTACTTCAA TCGTTCTCGC TTTTGATTTC TTCAAGTTCT GATGATGATT 
    ATCGGTAAAT TTCAACCTTG GATCTTTGGT AGATTTTGCT GTTGTCTCGT 
    GAATATTCAT CGCCAGTTTT GGCGGGAAAA TGTTTCTGCG GNGGTTTGTT 
    TTTGATTGAA TCTGAAACTT ACTATTGTNT TGNGCTCTNG ATTACNTTCT 
    TCNGATNTTA TTNGAAAGNT NACAGCCCGG GNCGNNNANC ANACNTGNCC 
    TATNNNNANN NNA

AT5G64540.1

Model type
Protein coding
Computational Description
unknown protein; Has 2125 Blast hits to 1062 proteins in 182 species: Archae - 6; Bacteria - 116; Metazoa - 913; Fungi - 305; Plants - 50; Viruses - 20; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64540.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64540.3

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 2125 Blast hits to 1062 proteins in 182 species: Archae - 6; Bacteria - 116; Metazoa - 913; Fungi - 305; Plants - 50; Viruses - 20; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64541.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR