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13-0736-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4947322 [Map]; Strand: c
      • AT5G15240.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: -345; Region: promoter
      • AT5G15240.2 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: -345; Region: promoter
    Flanking Genome Sequence: 13-0736-1 - 5-prime edge
    CACACAAATC TACCATAATT TGCGATTTGT GTGGTTCTAG AATTTAATGT 
    TAGTTGTATA AGAAAATTGG TAGGAAGAGA GAAAATAAAA CTCCACGAAG
    TTTTCCACTT TAATGTTAGG GCNGTTTAAC CTTAGGTGAT AGAGAGAATG
    CAAGTACCAA ATCCTCTTTC GGTGAAGACT GAAGAGGGAT CAAATTTTCA
    TAAAAATACA TGGTCCAAAG TAGTATATCA TGTCAATAAT CTGTTGGACG
    AGACTGGAGC ACTTGAATCG TCACATATTT TTTTGTTGTC GTTTGTTAAA
    AATAGTTGAC AAGTGAATCC CCAGACCTAA AGAGTAGATA AGTATGAATA
    GCCTTGATCT GACGTAAATC AATATCTTGA CGCTAGTTTA CAGTTATGTT
    CTACAAGGTG CCGAGTAGTT CTAACAATAA TGAAAATATC AACATATATA
    TTTATATATT TTCGTTACTA TTAAAACCAT ACTGGAAATT TTTTACAGTT
    ATCCNCTATG TGTAATTNAG AAGTNGAAAC CNAAAACNTT TNTANGTNNN
    AAAAGGAGGC CTTTANAAAA NAAGAATACT NATNGGNGGC CATTTACCNA
    ATTANTGCTT GNGAAANNNT ATNCTCCCCN NGTTGGTTTN AAAAAAAAAN
    GCTTNNNNNA AAGNAAANAA NAAAAAANNC NNTTNNGNTN TNNGAAAAAA
    AAANANNANN GNCNCTTNNN NAGANCCAAA NCTTTTTNGN
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4947395 [Map]; Strand: c
      • AT5G15240.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: -272; Region: promoter
      • AT5G15240.2 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: -272; Region: promoter
    Flanking Genome Sequence: 13-0736-1 - 3-prime edge
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    GTAAGTGGTT ATAATTTTTT TCTATATAAA GAGTTGCACT TAAATTTCAA
    TTAGTTTCTA AAAACCCCAT CCACGAATAT TTAATTGGTC AATAAACATT
    AAATAGAATT

AT5G15240.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1); Has 5045 Blast hits to 4985 proteins in 317 species: Archae - 15; Bacteria - 153; Metazoa - 1796; Fungi - 1055; Plants - 1275; Viruses - 9; Other Eukaryotes - 742 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G15240.2

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT3G28960.1); Has 3693 Blast hits to 2957 proteins in 241 species: Archae - 0; Bacteria - 44; Metazoa - 1493; Fungi - 511; Plants - 1240; Viruses - 0; Other Eukaryotes - 405 (source: NCBI BLink).
Link
InterPro Scan - TAIR