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13-0745-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3684694 [Map]; Strand: c
      • AT1G11055.1 - [+] show detail
        Distance: -599; Region: promoter
      • AT1G11060.1 - [+] show detail - WAPL (Wings apart-like protein regulation of heterochromatin) protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0745-1 - 5-prime edge 
    ACGGCGGCCG TAGGTTCGTT CCATCATCGC CGAGACGAGT CGTTGAATTN 
    CGCAAATNTN NGGGGAANAN TTTCANGNGA NAAAATCGAA ACAAGGGTAT 
    TTCGGGAAGA AAGACAAATA TATAAAAGTG CTCGTAAGAT CTGCGTAGCT 
    GAAGAAGAGA GCAGCAAATG CGATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3684810 [Map]; Strand: c
      • AT1G11055.1 - [+] show detail
        Distance: -715; Region: promoter
      • AT1G11060.1 - [+] show detail - WAPL (Wings apart-like protein regulation of heterochromatin) protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0745-1 - 3-prime edge 
    GCCGCCGTAA GCCGGGGATT CCGAGGACCC TATCGGACTC TCTAAACGAC 
    TCTGTTTCTC AGACTGAGTA TCTCTCTTCC TCTTCGTCGC CGGACATCGA 
    GCCCATTGAT TACTCTCTCC TTCCTTTCTC CAGTCAAGAG TCTTCCTCTC 
    TCTGGCATTC TTCTTCCAGG TCAAATTTCA GAGAGGATTA TCCACAGAAC 
    GGAGGTGTTG TACGGAGGGC GAAAAGAGTC AGGAACGGTG CTGAGGCTGC 
    TGCTTTTACT TCCACTTTGC TTGAGGCTCA GGAGTTTGGT GAGCTGATGG 
    AGCATGAGGA TGAGGTTAAC TTTGCGCTTG ATGGGTTGAG GAAAGGACAC 
    CAGCTCAGGA TCAGAAGAGC TAGCTTGTCC TCTCTATTGT CGATTTGTGC 
    ATCTCAACAC CAGCGTCGCT CCTTGAGGGC TCAAGGGTAA GAAGCT

AT1G11055.1

Model type
Pseudogene
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Link
InterPro Scan - TAIR

AT1G11060.1

Model type
Protein coding
Short Description
WAPL (Wings apart-like protein regulation of heterochromatin) protein
Computational Description
WAPL (Wings apart-like protein regulation of heterochromatin) protein; BEST Arabidopsis thaliana protein match is: WAPL (Wings apart-like protein regulation of heterochromatin) protein (TAIR:AT1G61030.1); Has 319 Blast hits to 253 proteins in 105 species: Archae - 2; Bacteria - 73; Metazoa - 168; Fungi - 7; Plants - 48; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Link
InterPro Scan - TAIR