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13-0772-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18732966 [Map]; Strand: c
      • AT3G50480.1 - [+] show detail - homolog of RPW8 4
        Distance: -102; Region: promoter
    Flanking Genome Sequence: 13-0772-1 - 5-prime edge 
    CTCATAGACT TAGTACTGTA CGGGTCAACT CTCTTTTTTT CTAGGTAAGA 
    AGAGATCGTT GGGTTTATAT GCAAATTGTC CTGAGTATTA AATTACGTCG 
    AAGAAGCGAG CNGTCAATCG ACNGAAGTTG GCCTGAGGAA GAACAGAAGA 
    AGAAAAACAG AGAAGGAAGC CAAAAAGCAG AAGAGGAAAA TGGTGGTATC 
    AACTAAAAAT ATTTCAACAA AAGAAGTTAC TACTAAAAAT AAATACTTTG 
    CGTGTTGCAG TATATATTTA ACATTTAGAA ATAATTATAT TTATTAAAAA 
    AATATCATTT TGTTATAGAC GTTTGATTAT GATATATAGA ATTATTTTGT 
    AGATATGAGA AAGACCAGAA TACGTATTGT TGTTTTGCCG TGTTTGCAAA 
    TAAACTATTA TTATTATGAA TTTGAATTAG CCCATAATAT TATAATTAAA 
    TCTCAAAAAC TTATTCCAAA CTGAAAAAAA ACAAAACAAA AAAAAATACT 
    GANGTTAAAA ACCACTAATC TGAAAGATCC ACTNTAATGC GCCATATACA 
    TTTTTCTTGT TGTTGAGCCT TTTACACATG TGTAGACACA TTATATTTTT 
    CTTCCTCCAA TTTTTCGTTT ACNCTTCAAA GATGGGATCA AATCAAATGA 
    GAANAATCCT TAAAACCTTT

AT3G50480.1

Model type
Protein coding
Short Description
homolog of RPW8 4
Curator Summary
Homolog of RPW8
Computational Description
homolog of RPW8 4 (HR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808); BEST Arabidopsis thaliana protein match is: homolog of RPW8 3 (TAIR:AT3G50470.1); Has 106 Blast hits to 90 proteins in 15 species: Archae - 14; Bacteria - 4; Metazoa - 2; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR