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13-0819-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21935178 [Map]; Strand: w
      • AT5G54050.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0819-1 - 3-prime edge 
    TTTNAAANCN NTAGAGGTAT TTTTCCGACC GTTACCGACC GTTTTCATNC 
    NTNNCGAGGG AGCGCGGANA TNATGATGCA CANNGACNGC ANTTCGACCG 
    CTTATTCAAT CANCCATTTA TATGCAATCA CATTCTCAAG ATCTTTGTTA 
    GCACTATCTC ACCACTTGAC AGTATAGTTG ACGACCTTTG TCATTTTTGT 
    CGATTTGAGG TTCATCATAT GTTTCTTCGT TGCACGATAT GCAACATAAG 
    CCTGCATATA GGATGTGTGG CGGAGCCACC ACCACTCACA ATTTCTGAAC 
    CAAAACACCA CAAGCATAGC CTCAGTCTCC TGCTAAGGCT AGTCACCTTT 
    ACTTGTAATG CTTGTGGTGT GGAAGGCGAC CGCAATCCTT ACCTATGTCT 
    TGAATGCAAT CTGATGGTCC ACAAAGATTG TGTTGAGAAT CTACCGCGAG 
    TCATAAGCAT AAATCGGCAT GACCATCGCA TATNNNATAC TTTTNCATCT 
    TGGTGAAAAA GAAGGAGATC GNGAGTGTGG ATTTNGTNNA NNAGATNATT 
    ANATNGGGNN AANGGAGGCT ATAAAATGCC TTCGGTTNTC NTAGTTATGC 
    CGTTCNTTCA AAANGNGCTC CAAANAANCN AATTTGNGGN ATTGNGNTAN 
    NNNCTGNGAA TNATGNNCCC NACGNTGAAA AAANANNTTN CANATCCCTT 
    ANTNGGNATA TNAACNNNNN AGNGGANNNC ATTGANNAAT ATNNGNNANA 
    NAAAAANAAA ATAAAN

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21935193 [Map]; Strand: w
      • AT5G54050.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0819-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC AATAATTTAT TGGATATTCG CAGGGCCGGT CCGTGGTATT 
    CAGATGTCCT ATACCACCAA AAAAAGCCAT GCTCTTTAAA AAATTTTCTT 
    TTTTGTAATA TCATAAATAA TATTAATACA AAATTGTCAT ACTTGAAACT 
    TAAAAAACAG TGATTAATTC AATAAGCAGT TTATAAAGAA AGAAAAAAAT 
    GGTAAAATCA CAAATAATAT TAATATACCT TAGTAAGCT

AT5G54050.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G54040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR