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13-0846-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 1356336 [Map]; Strand: w
      • AT2G04070.1 - [+] show detail - MATE efflux family protein
        Distance: -546; Region: promoter
    Flanking Genome Sequence: 13-0846-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA TATCACAATA ACCTAATAAC AAAGACAAAC 
    AAAAGAGACA ATTCGGTCAT TTTGAAATAC AAATGGTGGA CGTCGTCGTC 
    AACACTCAAC AGTCGTCCAA TATCAGCATT TTGGAAATAC ATGATAATAC 
    ACNTTGGGGA TCACGTTCCA ATGATCTATG ACTAAACAAC AAAGGCAACT 
    CGAATAATTA CNTTGGGAAT CAAGTTCTAA TCATATCATA GATTAAACAA 
    AAGATAATGA CATTGTTACA AAAAAAAAAA ANANAGTTGG TTTNANCAGT 
    TNNTNTTAAA AAANAAAAAN GTNTTANTTA ANAAAAACNT TTTTTNGGTT 
    NAANTANCAN CTANACNGTT NAAACGNGCA GNTGNGGCNG ANAAAANGGT 
    GGGAATTACC AGCCNGGGCC GTNNACCNCC CGGGCCCCTT AAANNNA

AT2G04070.1

Model type
Protein coding
Short Description
MATE efflux family protein
Computational Description
MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: transport, drug transmembrane transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G04080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR