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13-0931-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18866702 [Map]; Strand: c
      • AT5G46510.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon9 (3UTR)
    Flanking Genome Sequence: 13-0931-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAA ATATCCCTAA TAAGAAAAAA GACCAATTCA 
    CAAACATTAG CAATTGCACC ACTGTTGTCA TACACCTTAA CGAAAGTTTC 
    CTCTTTTCTG CTGGATCTTG ACTTAATCAT CTCTTTTAGA TTTGGACTTA 
    ATCGCCACCA CTCAAGTAAA AACCATGTCC ATAGCCTCTT ATTCTTACAT 
    TAATATCTTG TCAGATCCGT AACCAACATT GGTCATCAAA GTGACTTCCT 
    CCAGCTTTCC TGAACAATAA CAATTGCAAG ACAAAAGAAT CATCAGAGAA 
    TGAAAGTTAA GCATATCATT AGAGAATCAA AACAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 3618939 [Map]; Strand: c
      • AT2G08986.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 13-0931-1 - 3-prime edge 
    ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCACCG 
    TGAATTATAC ATATAAAATG TAACATTAGA TTCGAAATAG TGGTTCTAAC 
    TAAAGCTTGG TTAGTGTTTT GGAGTCGAAT ATGACTTGAA GTCATGCGTA 
    TGATTGAGTA TAAAAACTTA AACCGCAATC CGATCTTATA AGCCTAAGTA 
    GATTTTCCTT GTTAGAATAT ACAAAGGCGA AGACTCATAC GGACTTTGGC 
    TACACCATGA AAGCT

AT2G08986.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G40104.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G46510.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G46520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR