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13-0960-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11631379 [Map]; Strand: c
      • AT1G32240.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: -753; Region: promoter
    Flanking Genome Sequence: 13-0960-1 - 3-prime edge 
    ATCTTTAGCA TCCCACACGC TCTCTATCCT TGCTTTTAAC TGAAACCCAA 
    GGTTGATTTC TCCTTTTTAT ACACCCTATA TTCATTCCAA AAAGAAGAAT 
    AAAATTTTAA TAAAGGTTAA ATCACAAATA TTAAAATGTA GGAACAAAGA 
    AAAAGATGAA AAGTGAGAGT GAGAAAAAGG AAAAAAAGAG GAACAAAACA 
    AAGTTTGCTT ATTTTAGCTT GTATGACTCT CTTTCACATG ATTATCACTT 
    TTCTCTTCTC CCTATGTTTT TTTTTCCTTG AATTATNCCT TAATGATTAA 
    AAACCCTTAC CACATGTTTT TTGAATAATC TGTTTCCTCA NAGNGATGTT 
    CAAATCAAGT CCAACATAAA CTCTGCAACT GCTACAGNGA ATATCTCAAT 
    GAACGATAGC GACCAANGNG AATTACTCNA

AT1G32240.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Curator Summary
Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.
Computational Description
KANADI 2 (KAN2); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G17695.1); Has 1778 Blast hits to 1772 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 73; Fungi - 21; Plants - 1618; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Link
InterPro Scan - TAIR