Home
Mutant Lines
13-0968-1

13-0968-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 3794060 [Map]; Strand: w
- AT1G11290.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: -177; Region: promoter
- AT1G11300.1 - [+] show detail - protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;ki...
  Distance: -178; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCAA CTTTGGTCAA TCAAACCGTA GAAAGACCGC 
CATTAATAGA AAAATGATGA ATCTTTTAGC TAGCATCATC ATCTTAGAGG 
AAACAGTGCC ACTTGACTTT GACATTTCTA ACAATATTTG GACTTTTCTC 
TTGAGAATTT AATCATCACC ACAACATTAC AGAATCACNT TAACGTAACT 
CAAGACCCTA CCATTGTTAA TTGTTACATT CAATGCTGAG ATCTTTGCTA 
TTAATAGATC GGTTGTGTTT GTGTTGTTTC AGGACATATT AAGAACACAA 
AAGCTAGCTA CACCAAATTG GGACTGTTCT TGAGAAGCTG GTACTGAAGC 
TATGAGACTT CATGAGAGCT TGAGTCCTTT TGTTTGTATT CTTGTACTGT 
CTTGCTTCTT CTTGAGCGTG TCTCTGGCTC AGGAAAGAGC TTTCTTTTCT 
GGCAAGCTCA ATGATTCCGA GACGATTGTC TCTAGCTTTC GGACGTTCAG 
GTTCGGTTTC TTCAGCCCTG TTAATTCCAC AAGTCGATAT GCTGGTATAT 
GGTATAACAG TGTTTCTGTA CAAACTGTGA TATGGGTTGC TAACAAAGAT 
AAGCCGATCA ATGATTCTTC TGGAGTTATT TCGGNTTCTC AAGATGGAAA 
TCTTGTANTT ACGGATGGAC AGANGCGTGT TCTATGGTCA ACTAACGTCT 
NTACTCAAGC T

3 prime edge [+] show sequence

Chromosome: 1; Position: 3794037 [Map]; Strand: w
- AT1G11290.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
  Distance: -154; Region: promoter
- AT1G11300.1 - [+] show detail - protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;ki...
  Distance: -201; Region: promoter

TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCGAC 
TTGGTCTTAA TTCACCTGAG AAGAGTGACT CACTTCACCT TCTTCTCCGG 
AATAAGCTCA CGTCACTGTC AATTCAATCA AGTCCAGACA TTGTGGATAA 
AGTATATACT TCGAAGAAGG AATTGTCTAA AGGATTAATT TTTGCAGAAC 
AAAAGCATGA GCTCACAATT GGTGCAGGTC TCTACCGTTC CTCAAATCCC 
TAATTCGCCG TCTCGCCATC GTCACATTCT CTCCGAGAGA AATTACATTC 
CGGCTAATGT CTATGAGCAT CCAGCGGCTC TTCTTCTTGA GAGATGTTCT 
TCTCTGAAAG AACTTCGTCA AATTCTTCCT CTCGTTTTCA AAAATGGGCT 
TTATCAGGAG CATCTTTTCC AGACGAAGCT

AT1G11290.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Curator Summary: Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.
Computational Description: CHLORORESPIRATORY REDUCTION22 (CRR22); CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1); Has 48258 Blast hits to 14436 proteins in 289 species: Archae - 1; Bacteria - 2; Metazoa - 166; Fungi - 164; Plants - 47192; Viruses - 0; Other Eukaryotes - 733 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11300.1

Model type: Protein coding
Short Description: protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding
Computational Description: protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Apple-like (InterPro:IPR003609), PAN-2 domain (InterPro:IPR013227), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11330.2); Has 247442 Blast hits to 123826 proteins in 4585 species: Archae - 216; Bacteria - 26920; Metazoa - 91063; Fungi - 20518; Plants - 70734; Viruses - 831; Other Eukaryotes - 37160 (source: NCBI BLink).
Link: InterPro Scan - TAIR