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13-1002-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 259089 [Map]; Strand: w
      • AT5G01690.1 - [+] show detail - cation/H+ exchanger 27
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 13-1002-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAAG GGTTGCAGAA AATATCAAGC AAATCTTTTG 
    GAGCAATGGT GATGTCAGCA ACGGTAAACT CAACAATATT CATAGTGATA 
    GTGAAGAAAC TTTACCAAAC CATGAGCAAA CGCAACCCTT ACAAGAGACA 
    GTACNGGTGC AACACTGCCG AGTGGAGGCT CCCCTAAGGA TC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 259078 [Map]; Strand: w
      • AT5G01690.1 - [+] show detail - cation/H+ exchanger 27
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 13-1002-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATTATTGATT GTTATTGACC TAAAATTATA TATGTTCCAA AGTATATCCT 
    AAATGAATTA TTGTTACCGT GTAATTGAAA TTCTGTTTGT ATATTTGAAC 
    GTCGTAAAGT CCTTGTATAT TGACGATAAA CCCAACAAGA ATGGCGTGCC 
    AAAGAGGCAC TTTATAGTAA AGGGAAGGCA AGGCAATGGC TATCATTTTG 
    GCAAACCTGA CCACCCCAAA AAGTAGCTCA AACCGGATAA CATCTCTCCA 
    GGAAAACAGT GAGAGATCGA TATTGAGGCC AATCCCAATG ACGTAGCAAG 
    GCATCAGGAC AGACCAAACA AAACAACCGA TTTTGTCTGA GAGTCCCGTG 
    CCTAGAGGCG GACGTTTTGG GGTGGCTAGA CCTAAGACGA CCGCACCAAA 
    GAAGTAAGGT AAACCCACAA ATTCTGCCCA GAGGCAGGAG ATGAAGAGCA 
    AGACGCATAT AACAGAGAGA TAGGAGGCCT TGAGAGAGTG TCCTTCTGGT 
    GTTCGATTCT TCATCCACAG CATTAGTGGT CGGAACACAT ATGCTATCAC 
    CAATATCATT ATCATCTGCA TTCATTTCCG TCTTTATATC ATTAATAAAA 
    AAGCGTATAT ATAGATCAAA GCAAGTTTAT ACGTAAATAT TATTGTATTC 
    ATGCATTTTA TTAGGATGTT ACGTTGTCTA TTTCTGTAGG AATT

AT5G01690.1

Model type
Protein coding
Short Description
cation/H+ exchanger 27
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 27 (CHX27); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 26 (TAIR:AT5G01680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR