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Mutant Lines
13-1030-1

13-1030-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 4118419 [Map]; Strand: w
- AT3G12915.1 - [+] show detail - Ribosomal protein S5/Elongation factor G/III/V family protein
  Distance: 2711; Region: intergenic
- AT3G12920.1 - [+] show detail - SBP (S-ribonuclease binding protein) family protein
  Distance: 3464; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGAC 
AACCATGGAA CAACTATGAT ATATATTGAT GGCCTCCTTT CTTTATCTTT 
TCTTCTTTCT CACAACTCTT TACTAAATAT TCTACCTTTC AAACCAAAGT 
GGAACGCAAC TTTCGGTTTT TTATCAAAGT CGTCCATAGN CTTTGACACA 
GNCCGAGAGA TTAAGATATT GATTGTGNAT TTAAGTNAGA AAATTGTTGC 
ATTNGCCATG TTNGTGATTG TGTATGTATG CATATAGTAT TATCATGTTG 
GAATTGAAAG TCAAAACGCA AACATATATA GACTAGAATA AATGTAACGT 
GTTCATTGGC ATTNGCTTTT ACAACCCGCA AAAACACTAA AAATATGAAT 
TATGCGTCTT TTTTTCTCTA ATCCCAAACA AAAATGTAAT CAAATTCCTA 
ACCAGAAAAA TGTAAACAAA AATTGGAATG AAGGATCAGA TTACGAGTGG 
GTACCATNAG ACCTTATATC AAAGTATTAG GCACATAATN CTCACTTCCG 
CACTCTANAA TCTTGATCAT TTCCTGTTTT AATTGGGGTG TGGGACATAT 
GCATAAGGCT ATTTGTTCAT GATAGTTTAA TTTGNATCAA TTTGCTAAAG 
CCACATTATA TAATGTCTTA ATATCGNCCT TGTNGGTCAN ATCTTGGAGC 
CATCGTNTNC TANCAAGTAA CANTTTAAAC ATTATANNGA CANATATAAA 
TGNGCTTTAN TNNG

AT3G12915.1

Model type: Protein coding
Short Description: Ribosomal protein S5/Elongation factor G/III/V family protein
Computational Description: Ribosomal protein S5/Elongation factor G/III/V family protein; FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5/Elongation factor G/III/V family protein (TAIR:AT1G56070.1); Has 62937 Blast hits to 55974 proteins in 4670 species: Archae - 1189; Bacteria - 40681; Metazoa - 3235; Fungi - 1899; Plants - 1092; Viruses - 1; Other Eukaryotes - 14840 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G12920.1

Model type: Protein coding
Short Description: SBP (S-ribonuclease binding protein) family protein
Computational Description: SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2); Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 874; Fungi - 0; Plants - 566; Viruses - 36; Other Eukaryotes - 158 (source: NCBI BLink).
Link: InterPro Scan - TAIR