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13-1031-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17941903 [Map]; Strand: w
      • AT4G38280.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolys...
        Distance: 0; Region: intron1 (5UTR)
      • AT4G38290.1 - [+] show detail - Haemolysin-III related integral membrane protein
        Distance: -968; Region: promoter
    Flanking Genome Sequence: 13-1031-1 - 5-prime edge 
    NNTCNGNCNG ANCCGCCTAC NTNANNATNT CCGNTCTACA NGNNAATTGT 
    NTTGCTNGGC GCTCCNCCGA TCGANNATTC ACTGATCAGA TTCTAATAAT 
    TATAATCCTG AGTCCTCGTT TGGTTGATGT TGAAGCACCG CAGATCCTCT 
    TTGAACTTGT TATTTGTAAG CT

AT4G38280.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolysin-III homolog (TAIR:AT2G45250.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38290.1

Model type
Protein coding
Short Description
Haemolysin-III related integral membrane protein
Computational Description
Haemolysin-III related integral membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 4 (TAIR:AT4G37680.2); Has 1144 Blast hits to 1144 proteins in 198 species: Archae - 0; Bacteria - 18; Metazoa - 607; Fungi - 265; Plants - 172; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR