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Mutant Lines
13-1106-1

13-1106-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 19884786 [Map]; Strand: c
- AT1G53310.1 - [+] show detail - phosphoenolpyruvate carboxylase 1
  Distance: 0; Region: exon10 (CDS)
- AT1G53310.2 - [+] show detail - phosphoenolpyruvate carboxylase 1
  Distance: 0; Region: exon10 (CDS)
- AT1G53310.3 - [+] show detail - phosphoenolpyruvate carboxylase 1
  Distance: 0; Region: exon9 (CDS)

AAAAAAAAAA AAAAAACTNT TNGGNNANTN ANANCAGCTT TCGCNNTNNG 
CCGNACTGGG CCTTTCTTTT CANACACCAT TGNTNTNTTA NAAATGGTGT 
TNGCTAAAGG ANATCCTGGT ATTGCTGNTT TGTACGATNA CGCTTCTTGT 
TTCAGAGGAA CTCTGNNNTN TTGGTGANAA ACTCANAGCT AACNTTNAAA 
NAAACCNAGA NACTCAAACT AAAAGNANAA ACNNAANNNN NCCCNGACTT 
TTTNCGTTCT TNNNGATNAA AACNATTTNG CGCCTTGAAN AGGNNNNNGA 
TNTTTTCCCA CACNCCNGGG ANNAAAAGAN NAAAAAANNC NGGCGGGNGC 
AANNNNAACN NAACCCCNNN NAATNNCGAG GGAGTCACNN NNGACCNNNA 
NCNAGTAGNN NAACAANAAN CCTNCGTCTT GCNCTNNANG NCAACACGAC 
CNGCCANGGN NCCGGNGNAN ANNGNNNCGN NTNANCTNTN CCGCNTGGCG 
CNNCTTNNGG CNNTNAANTN NATNGNNCNA CATNNTNNTN CNNNGAGCGG 
GTCCAANTAA NCNAAANNTG NNNCNTNNGG GCNGCNNANN NNNANNANTT 
AANNTTCATA TTCNTNCANN AAAATAANAC CATCGCNTNC CTGTNGCGAN 
NGCACGAGTN NANAANACCN TTAANTNCNN TATNNNTCAA CCACCNANAN 
CNNANGGANN ANNNAGNCCN NANAANGATA NAAGNATTGT CNNNNNNNGN 
TNNTNAANTN TTTGNNNAGN TATNNNGATA TNACNANANN GGNTTNAAGA 
GANTCNTNCG NCNCNCCATA NANANAANAT ATATNAAANA NNNAGAANCA 
TGNAAANNNC AAANANNNCC GGAANNNCGG ANANCNNAAC NNAAATAGAT

AT1G53310.1

Model type: Protein coding
Short Description: phosphoenolpyruvate carboxylase 1
Curator Summary: Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
Computational Description: phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 6864 Blast hits to 6795 proteins in 1908 species: Archae - 27; Bacteria - 2661; Metazoa - 3; Fungi - 0; Plants - 1763; Viruses - 0; Other Eukaryotes - 2410 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G53310.2

Model type: Protein coding
Short Description: phosphoenolpyruvate carboxylase 1
Curator Summary: Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
Computational Description: phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G53310.3

Model type: Protein coding
Short Description: phosphoenolpyruvate carboxylase 1
Curator Summary: Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
Computational Description: phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS IN: protein binding, phosphoenolpyruvate carboxylase activity; INVOLVED IN: response to salt stress, tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 3 (TAIR:AT3G14940.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR