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13-1194-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26839043 [Map]; Strand: w
      • AT5G67260.1 - [+] show detail - CYCLIN D3;2
        Distance: 1232; Region: intergenic
      • AT5G67265.1 - [+] show detail - unknown protein.
        Distance: 426; Region: intergenic
    Flanking Genome Sequence: 13-1194-1 - 5-prime edge 
    TCCACGGTCT TTATACGTTA CTTATATCCT TGTTACATAT TTAAACAAAT 
    TCAGCACACA CAAATAGTTG GGAAAAATAA TGAGACACAG AATAAAATAA 
    GACATGAAAT AAATTAACCA ACGAAAAAAA AGAAGAAGAG AAACTTCCGA 
    TGGTTACCTT ATTGGTGGTG ATGAACAAAA ATACTTCTTT TTTTTCATGC 
    AAAGAAAACT AAAAAAGGAA TAAGGTTCTG CCTTTAATGA GTTATCTGAT 
    AANAAATAAA GATTTGGAAA AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26838927 [Map]; Strand: w
      • AT5G67260.1 - [+] show detail - CYCLIN D3;2
        Distance: 1116; Region: intergenic
      • AT5G67265.1 - [+] show detail - unknown protein.
        Distance: 542; Region: intergenic
    Flanking Genome Sequence: 13-1194-1 - 3-prime edge 
    ACCGTGGAGT ACAAAAACGT GAGCTTTACC GTGTGGGATG TTGGTGGGAA 
    AGACCGACGT ACGTATACTA CTTTAAAACA AAAAATTATA AAGCT

AT5G67260.1

Model type
Protein coding
Short Description
CYCLIN D3;2
Curator Summary
Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.
Computational Description
CYCLIN D3;2 (CYCD3;2); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;3 (TAIR:AT3G50070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67265.1

Model type
Protein coding
Computational Description
unknown protein.
Link
InterPro Scan - TAIR